Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TLR4O00206 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TLR4O00206 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
TLR4O00206 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TLR4O00206 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TLR4O00206 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TLR4O00206 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TLR4O00206 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TLR4O00206 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TLR4O00206 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TLR4O00206 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TLR4O00206 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.4■□□□□ 0.22
TLR4O00206 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.4■□□□□ 0.22
TLR4O00206 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TLR4O00206 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TLR4O00206 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TLR4O00206 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TLR4O00206 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TLR4O00206 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TLR4O00206 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TLR4O00206 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TLR4O00206 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.4■□□□□ 0.22
TLR4O00206 AC241585.1-201ENST00000433527 519 ntBASIC16.4■□□□□ 0.22
TLR4O00206 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.4■□□□□ 0.22
TLR4O00206 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.4■□□□□ 0.22
TLR4O00206 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.4■□□□□ 0.22
TLR4O00206 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.4■□□□□ 0.22
TLR4O00206 RARRES2P9-201ENST00000565168 469 ntBASIC16.4■□□□□ 0.22
TLR4O00206 AC073389.1-201ENST00000595595 795 ntBASIC16.4■□□□□ 0.22
TLR4O00206 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.4■□□□□ 0.22
TLR4O00206 AC008761.3-201ENST00000624803 892 ntBASIC16.4■□□□□ 0.22
TLR4O00206 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
TLR4O00206 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TLR4O00206 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TLR4O00206 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
TLR4O00206 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TLR4O00206 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.4■□□□□ 0.22
TLR4O00206 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TLR4O00206 TNRC18P3-201ENST00000441896 2691 ntBASIC16.4■□□□□ 0.22
TLR4O00206 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TLR4O00206 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TLR4O00206 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
TLR4O00206 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TLR4O00206 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TLR4O00206 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TLR4O00206 LINC02012-201ENST00000608206 1725 ntBASIC16.39■□□□□ 0.21
TLR4O00206 CROCCP2-202ENST00000412962 2773 ntBASIC16.39■□□□□ 0.21
TLR4O00206 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TLR4O00206 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TLR4O00206 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TLR4O00206 AP3S2-216ENST00000617003 1561 ntBASIC16.39■□□□□ 0.21
TLR4O00206 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TLR4O00206 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TLR4O00206 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TLR4O00206 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TLR4O00206 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TLR4O00206 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
TLR4O00206 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TLR4O00206 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TLR4O00206 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TLR4O00206 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TLR4O00206 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.39■□□□□ 0.21
TLR4O00206 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TLR4O00206 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TLR4O00206 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.39■□□□□ 0.21
TLR4O00206 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TLR4O00206 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.39■□□□□ 0.21
TLR4O00206 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.39■□□□□ 0.21
TLR4O00206 AC027369.6-201ENST00000525520 931 ntBASIC16.39■□□□□ 0.21
TLR4O00206 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.39■□□□□ 0.21
TLR4O00206 AC003101.2-201ENST00000612557 442 ntBASIC16.39■□□□□ 0.21
TLR4O00206 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TLR4O00206 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TLR4O00206 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.39■□□□□ 0.21
TLR4O00206 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TLR4O00206 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TLR4O00206 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TLR4O00206 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.39■□□□□ 0.21
TLR4O00206 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TLR4O00206 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TLR4O00206 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TLR4O00206 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TLR4O00206 TUBB8P12-201ENST00000308911 1335 ntBASIC16.39■□□□□ 0.21
TLR4O00206 TUBB7P-202ENST00000428444 1305 ntBASIC16.39■□□□□ 0.21
TLR4O00206 TUBB8P7-204ENST00000567960 1332 ntBASIC16.39■□□□□ 0.21
TLR4O00206 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TLR4O00206 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TLR4O00206 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TLR4O00206 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.39■□□□□ 0.21
TLR4O00206 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TLR4O00206 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TLR4O00206 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
TLR4O00206 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TLR4O00206 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TLR4O00206 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.38■□□□□ 0.21
TLR4O00206 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TLR4O00206 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.38■□□□□ 0.21
TLR4O00206 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.38■□□□□ 0.21
TLR4O00206 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.38■□□□□ 0.21
TLR4O00206 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms