Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC187A0A096LP49 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC187A0A096LP49 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC187A0A096LP49 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC187A0A096LP49 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC187A0A096LP49 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CCDC187A0A096LP49 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC187A0A096LP49 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CCDC187A0A096LP49 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 AL671710.1-201ENST00000610245 2349 ntBASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 PKD1P1-201ENST00000458669 6805 ntBASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 SPDYE19P-201ENST00000338590 713 ntBASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 RN7SL752P-201ENST00000463779 287 ntBASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 DOC2GP-202ENST00000514950 1163 ntBASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CCDC187A0A096LP49 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 INE1-201ENST00000456273 945 ntBASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 AC010336.2-201ENST00000564226 506 ntBASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 AC026979.3-201ENST00000607315 403 ntBASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC187A0A096LP49 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC187A0A096LP49 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms