Protein–RNA interactions for Protein: A0A087WXM4

Uncharacterized protein, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A087WXM4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
A0A087WXM4 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
A0A087WXM4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
A0A087WXM4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
A0A087WXM4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
A0A087WXM4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
A0A087WXM4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
A0A087WXM4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
A0A087WXM4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
A0A087WXM4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.22■□□□□ 0.03
A0A087WXM4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
A0A087WXM4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.22■□□□□ 0.03
A0A087WXM4 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
A0A087WXM4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
A0A087WXM4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
A0A087WXM4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
A0A087WXM4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.21■□□□□ 0.03
A0A087WXM4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
A0A087WXM4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
A0A087WXM4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
A0A087WXM4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.21■□□□□ 0.03
A0A087WXM4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
A0A087WXM4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.21■□□□□ 0.03
A0A087WXM4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
A0A087WXM4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
A0A087WXM4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
A0A087WXM4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
A0A087WXM4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
A0A087WXM4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.21■□□□□ 0.03
A0A087WXM4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
A0A087WXM4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
A0A087WXM4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
A0A087WXM4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
A0A087WXM4 MIR648-201ENST00000385046 94 ntBASIC15.21■□□□□ 0.03
A0A087WXM4 ESRRAP1-201ENST00000400596 1257 ntBASIC15.21■□□□□ 0.03
A0A087WXM4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.21■□□□□ 0.03
A0A087WXM4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.21■□□□□ 0.03
A0A087WXM4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.21■□□□□ 0.03
A0A087WXM4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.21■□□□□ 0.03
A0A087WXM4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
A0A087WXM4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.21■□□□□ 0.03
A0A087WXM4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
A0A087WXM4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
A0A087WXM4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
A0A087WXM4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
A0A087WXM4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
A0A087WXM4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.21■□□□□ 0.03
A0A087WXM4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
A0A087WXM4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
A0A087WXM4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
A0A087WXM4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.21■□□□□ 0.02
A0A087WXM4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
A0A087WXM4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
A0A087WXM4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.21■□□□□ 0.02
A0A087WXM4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
A0A087WXM4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
A0A087WXM4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
A0A087WXM4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
A0A087WXM4 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
A0A087WXM4 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
A0A087WXM4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
A0A087WXM4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
A0A087WXM4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
A0A087WXM4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.2■□□□□ 0.02
A0A087WXM4 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
A0A087WXM4 AL049757.1-201ENST00000616842 1596 ntBASIC15.2■□□□□ 0.02
A0A087WXM4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
A0A087WXM4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
A0A087WXM4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.2■□□□□ 0.02
A0A087WXM4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
A0A087WXM4 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
A0A087WXM4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
A0A087WXM4 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
A0A087WXM4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
A0A087WXM4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
A0A087WXM4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
A0A087WXM4 AC068472.1-201ENST00000474589 881 ntBASIC15.2■□□□□ 0.02
A0A087WXM4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
A0A087WXM4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.2■□□□□ 0.02
A0A087WXM4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.2■□□□□ 0.02
A0A087WXM4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.2■□□□□ 0.02
A0A087WXM4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.2■□□□□ 0.02
A0A087WXM4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.2■□□□□ 0.02
A0A087WXM4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
A0A087WXM4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
A0A087WXM4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
A0A087WXM4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
A0A087WXM4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.2■□□□□ 0.02
A0A087WXM4 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.2■□□□□ 0.02
A0A087WXM4 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
A0A087WXM4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
A0A087WXM4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.2■□□□□ 0.02
A0A087WXM4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.2■□□□□ 0.02
A0A087WXM4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
A0A087WXM4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
A0A087WXM4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.19■□□□□ 0.02
A0A087WXM4 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
A0A087WXM4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
A0A087WXM4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
A0A087WXM4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms