Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 AC008677.1-201ENST00000519230 1561 ntBASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 KRT8P49-201ENST00000604166 1432 ntBASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 AC084018.2-201ENST00000613093 2607 ntBASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 AC069120.2-201ENST00000524091 540 ntBASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 SLC25A39P2-201ENST00000537614 270 ntBASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX2IPQ9Y2D8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.83■□□□□ 0.45
SSX2IPQ9Y2D8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSX2IPQ9Y2D8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
SSX2IPQ9Y2D8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SSX2IPQ9Y2D8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSX2IPQ9Y2D8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.83■□□□□ 0.45
SSX2IPQ9Y2D8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSX2IPQ9Y2D8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSX2IPQ9Y2D8 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSX2IPQ9Y2D8 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
SSX2IPQ9Y2D8 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 AL512638.1-201ENST00000457493 794 ntBASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 IGHV3-42-201ENST00000520410 361 ntBASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 AC239800.4-201ENST00000603712 296 ntBASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 MIR6080-201ENST00000617359 66 ntBASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSX2IPQ9Y2D8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 PP12613-201ENST00000424958 2230 ntBASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms