Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 AC092068.3-201ENST00000587894 2016 ntBASIC16.58■□□□□ 0.25
NCKAP1Q9Y2A7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NCKAP1Q9Y2A7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.58■□□□□ 0.25
NCKAP1Q9Y2A7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.58■□□□□ 0.25
NCKAP1Q9Y2A7 AC009053.2-201ENST00000563701 2365 ntBASIC16.58■□□□□ 0.25
NCKAP1Q9Y2A7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
NCKAP1Q9Y2A7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 AL353705.2-201ENST00000428243 662 ntBASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 AC241585.1-201ENST00000433527 519 ntBASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 AC073592.8-201ENST00000624126 511 ntBASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1Q9Y2A7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 AC007967.4-201ENST00000614700 386 ntBASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 AL671710.1-201ENST00000610245 2349 ntBASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NCKAP1Q9Y2A7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1Q9Y2A7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1Q9Y2A7 AC073439.1-201ENST00000624121 1774 ntBASIC16.56■□□□□ 0.24
NCKAP1Q9Y2A7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1Q9Y2A7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
NCKAP1Q9Y2A7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1Q9Y2A7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1Q9Y2A7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1Q9Y2A7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1Q9Y2A7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1Q9Y2A7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1Q9Y2A7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.56■□□□□ 0.24
NCKAP1Q9Y2A7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NCKAP1Q9Y2A7 AL035456.1-201ENST00000456064 1369 ntBASIC16.56■□□□□ 0.24
NCKAP1Q9Y2A7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
NCKAP1Q9Y2A7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1Q9Y2A7 AC236430.1-201ENST00000402231 743 ntBASIC16.56■□□□□ 0.24
NCKAP1Q9Y2A7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.56■□□□□ 0.24
NCKAP1Q9Y2A7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.56■□□□□ 0.24
NCKAP1Q9Y2A7 FAM207CP-201ENST00000443486 507 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms