Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
FOXJ3Q9UPW0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
FOXJ3Q9UPW0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FOXJ3Q9UPW0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FOXJ3Q9UPW0 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
FOXJ3Q9UPW0 NSUN5P1-202ENST00000421140 1535 ntBASIC14.56□□□□□ -0.08
FOXJ3Q9UPW0 NSUN5P2-203ENST00000457352 1529 ntBASIC14.56□□□□□ -0.08
FOXJ3Q9UPW0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.56□□□□□ -0.08
FOXJ3Q9UPW0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FOXJ3Q9UPW0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
FOXJ3Q9UPW0 AC079776.2-201ENST00000641154 1609 ntBASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 GGT4P-201ENST00000623672 1708 ntBASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 AC010491.1-201ENST00000563101 2797 ntBASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 AL353135.1-201ENST00000606729 504 ntBASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXJ3Q9UPW0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 IGHV3-47-201ENST00000425060 335 ntBASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 ABCD1P5-201ENST00000445663 754 ntBASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 SNX33P1-201ENST00000592116 1762 ntBASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 AC006449.6-201ENST00000612330 2296 ntBASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FOXJ3Q9UPW0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
FOXJ3Q9UPW0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.53□□□□□ -0.08
FOXJ3Q9UPW0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FOXJ3Q9UPW0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FOXJ3Q9UPW0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms