Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.9■□□□□ 0.3
EBF1Q9UH73 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF1Q9UH73 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EBF1Q9UH73 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF1Q9UH73 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF1Q9UH73 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF1Q9UH73 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF1Q9UH73 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF1Q9UH73 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EBF1Q9UH73 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
EBF1Q9UH73 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
EBF1Q9UH73 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.89■□□□□ 0.3
EBF1Q9UH73 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
EBF1Q9UH73 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF1Q9UH73 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
EBF1Q9UH73 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.89■□□□□ 0.29
EBF1Q9UH73 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF1Q9UH73 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF1Q9UH73 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF1Q9UH73 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.89■□□□□ 0.29
EBF1Q9UH73 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF1Q9UH73 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.89■□□□□ 0.29
EBF1Q9UH73 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF1Q9UH73 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF1Q9UH73 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF1Q9UH73 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.89■□□□□ 0.29
EBF1Q9UH73 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF1Q9UH73 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
EBF1Q9UH73 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.89■□□□□ 0.29
EBF1Q9UH73 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.89■□□□□ 0.29
EBF1Q9UH73 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EBF1Q9UH73 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.89■□□□□ 0.29
EBF1Q9UH73 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.89■□□□□ 0.29
EBF1Q9UH73 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EBF1Q9UH73 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF1Q9UH73 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF1Q9UH73 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.89■□□□□ 0.29
EBF1Q9UH73 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF1Q9UH73 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.89■□□□□ 0.29
EBF1Q9UH73 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF1Q9UH73 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF1Q9UH73 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EBF1Q9UH73 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF1Q9UH73 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.89■□□□□ 0.29
EBF1Q9UH73 TOP3BP1-201ENST00000420768 1380 ntBASIC16.89■□□□□ 0.29
EBF1Q9UH73 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EBF1Q9UH73 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
EBF1Q9UH73 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EBF1Q9UH73 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.88■□□□□ 0.29
EBF1Q9UH73 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EBF1Q9UH73 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EBF1Q9UH73 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
EBF1Q9UH73 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.88■□□□□ 0.29
EBF1Q9UH73 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EBF1Q9UH73 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.88■□□□□ 0.29
EBF1Q9UH73 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
EBF1Q9UH73 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
EBF1Q9UH73 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.88■□□□□ 0.29
EBF1Q9UH73 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.88■□□□□ 0.29
EBF1Q9UH73 SLC25A1P3-201ENST00000395415 828 ntBASIC16.88■□□□□ 0.29
EBF1Q9UH73 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.88■□□□□ 0.29
EBF1Q9UH73 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.88■□□□□ 0.29
EBF1Q9UH73 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.88■□□□□ 0.29
EBF1Q9UH73 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.88■□□□□ 0.29
EBF1Q9UH73 AP005018.1-201ENST00000525475 301 ntBASIC16.88■□□□□ 0.29
EBF1Q9UH73 MIR4453-201ENST00000584019 89 ntBASIC16.88■□□□□ 0.29
EBF1Q9UH73 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.88■□□□□ 0.29
EBF1Q9UH73 AC009118.2-201ENST00000613275 655 ntBASIC16.88■□□□□ 0.29
EBF1Q9UH73 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EBF1Q9UH73 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EBF1Q9UH73 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
EBF1Q9UH73 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EBF1Q9UH73 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EBF1Q9UH73 EGFEM1P-202ENST00000431685 1563 ntBASIC16.88■□□□□ 0.29
EBF1Q9UH73 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.88■□□□□ 0.29
EBF1Q9UH73 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
EBF1Q9UH73 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.88■□□□□ 0.29
EBF1Q9UH73 AL513477.1-201ENST00000602865 2407 ntBASIC16.88■□□□□ 0.29
EBF1Q9UH73 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EBF1Q9UH73 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.88■□□□□ 0.29
EBF1Q9UH73 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
EBF1Q9UH73 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
EBF1Q9UH73 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
EBF1Q9UH73 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
EBF1Q9UH73 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
EBF1Q9UH73 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EBF1Q9UH73 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.87■□□□□ 0.29
EBF1Q9UH73 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EBF1Q9UH73 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EBF1Q9UH73 PIN1P1-201ENST00000412108 996 ntBASIC16.87■□□□□ 0.29
EBF1Q9UH73 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.87■□□□□ 0.29
EBF1Q9UH73 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.87■□□□□ 0.29
EBF1Q9UH73 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.87■□□□□ 0.29
EBF1Q9UH73 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.87■□□□□ 0.29
EBF1Q9UH73 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
EBF1Q9UH73 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EBF1Q9UH73 AP001350.2-201ENST00000625104 1094 ntBASIC16.87■□□□□ 0.29
EBF1Q9UH73 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.87■□□□□ 0.29
EBF1Q9UH73 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EBF1Q9UH73 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms