Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE7Q9UBL6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE7Q9UBL6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 AC008677.1-201ENST00000519230 1561 ntBASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 TUBB3P1-201ENST00000405796 1332 ntBASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CPNE7Q9UBL6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 MST1L-201ENST00000442552 2185 ntBASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 AC051619.7-201ENST00000568314 623 ntBASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 MIR6080-201ENST00000617359 66 ntBASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.05■□□□□ 0.16
CPNE7Q9UBL6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CPNE7Q9UBL6 AC006538.1-201ENST00000567905 1585 ntBASIC16.04■□□□□ 0.16
CPNE7Q9UBL6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE7Q9UBL6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CPNE7Q9UBL6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE7Q9UBL6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms