Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC002310.6-201ENST00000624451 1377 ntBASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 AL021920.2-201ENST00000624828 1351 ntBASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 GGT4P-201ENST00000623672 1708 ntBASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 AF238378.1-201ENST00000526806 358 ntBASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 AL773604.1-201ENST00000617417 272 ntBASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 REXO1L6P-202ENST00000619970 1078 ntBASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCM2LQ9NUG4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 GGT3P-204ENST00000453783 1664 ntBASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 FAM220CP-201ENST00000395253 831 ntBASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 POLD2P1-201ENST00000511220 997 ntBASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCM2LQ9NUG4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCM2LQ9NUG4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CCM2LQ9NUG4 AC073347.1-201ENST00000421633 2643 ntBASIC15.83■□□□□ 0.13
CCM2LQ9NUG4 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.83■□□□□ 0.13
CCM2LQ9NUG4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCM2LQ9NUG4 AC006449.6-201ENST00000612330 2296 ntBASIC15.83■□□□□ 0.13
CCM2LQ9NUG4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms