Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 AL359258.3-201ENST00000622910 2331 ntBASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 AK4P3-201ENST00000418260 669 ntBASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 AC073912.3-201ENST00000624414 853 ntBASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 AC078925.2-201ENST00000624013 1973 ntBASIC14.53□□□□□ -0.08
C12orf4Q9NQ89 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 AL049757.1-201ENST00000616842 1596 ntBASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 AC079328.2-201ENST00000561241 3354 ntBASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.52□□□□□ -0.08
C12orf4Q9NQ89 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
C12orf4Q9NQ89 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
C12orf4Q9NQ89 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
C12orf4Q9NQ89 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
C12orf4Q9NQ89 AC005521.1-201ENST00000393351 872 ntBASIC14.52□□□□□ -0.09
C12orf4Q9NQ89 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.52□□□□□ -0.09
C12orf4Q9NQ89 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
C12orf4Q9NQ89 AL645929.1-201ENST00000420084 975 ntBASIC14.52□□□□□ -0.09
C12orf4Q9NQ89 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.52□□□□□ -0.09
C12orf4Q9NQ89 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.52□□□□□ -0.09
C12orf4Q9NQ89 STK25P1-201ENST00000585406 838 ntBASIC14.52□□□□□ -0.09
C12orf4Q9NQ89 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.52□□□□□ -0.09
C12orf4Q9NQ89 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
C12orf4Q9NQ89 AL138831.2-201ENST00000606564 490 ntBASIC14.52□□□□□ -0.09
C12orf4Q9NQ89 AL592071.1-201ENST00000611956 408 ntBASIC14.52□□□□□ -0.09
C12orf4Q9NQ89 AL359183.1-201ENST00000623796 2132 ntBASIC14.52□□□□□ -0.09
C12orf4Q9NQ89 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
C12orf4Q9NQ89 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms