Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 AC073621.1-201ENST00000392730 636 ntBASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 UPK3BP1-201ENST00000428678 509 ntBASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 DUSP5P1-201ENST00000441325 1139 ntBASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 AP001350.2-201ENST00000625104 1094 ntBASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SLC52A3Q9NQ40 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 PRAL-201ENST00000624952 3286 ntBASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 TNRC18P2-201ENST00000417666 2714 ntBASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 AC021087.4-201ENST00000563761 564 ntBASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 SSR4P1-203ENST00000599569 2260 ntBASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 AC006058.4-201ENST00000624016 1670 ntBASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC52A3Q9NQ40 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 264.5 ms