Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
MKKSQ9NPJ1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.71■□□□□ 0.11
MKKSQ9NPJ1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.71■□□□□ 0.1
MKKSQ9NPJ1 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
MKKSQ9NPJ1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MKKSQ9NPJ1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
MKKSQ9NPJ1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MKKSQ9NPJ1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MKKSQ9NPJ1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.71■□□□□ 0.1
MKKSQ9NPJ1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
MKKSQ9NPJ1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 KRT8P39-201ENST00000396270 1433 ntBASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 AC243562.1-201ENST00000560672 389 ntBASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 AC099398.1-201ENST00000567919 2776 ntBASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.7■□□□□ 0.1
MKKSQ9NPJ1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 AC005915.1-201ENST00000624912 2018 ntBASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 AL592309.1-201ENST00000443127 649 ntBASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 AC105020.1-201ENST00000435356 2205 ntBASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
MKKSQ9NPJ1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms