Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 MIR346-201ENST00000362234 95 ntBASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 MRPS18AP1-201ENST00000414458 589 ntBASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 AC107890.1-201ENST00000422478 521 ntBASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 RN7SL589P-201ENST00000481268 310 ntBASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 RN7SL204P-201ENST00000582831 262 ntBASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 AL096865.1-201ENST00000606796 927 ntBASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 AP001059.3-201ENST00000619053 235 ntBASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 AC008267.7-201ENST00000624570 1194 ntBASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 AL031731.1-201ENST00000642131 2094 ntBASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP4-3Q9BYR4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP4-3Q9BYR4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP4-3Q9BYR4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC5.61□□□□□ -1.51
KRTAP4-3Q9BYR4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms