Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.3□□□□□ -0.12
NICN1Q9BSH3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.3□□□□□ -0.12
NICN1Q9BSH3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NICN1Q9BSH3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NICN1Q9BSH3 AC116407.4-201ENST00000623319 1061 ntBASIC14.3□□□□□ -0.12
NICN1Q9BSH3 AC073592.4-201ENST00000623827 446 ntBASIC14.3□□□□□ -0.12
NICN1Q9BSH3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NICN1Q9BSH3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NICN1Q9BSH3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.3□□□□□ -0.12
NICN1Q9BSH3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.3□□□□□ -0.12
NICN1Q9BSH3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.3□□□□□ -0.12
NICN1Q9BSH3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.3□□□□□ -0.12
NICN1Q9BSH3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NICN1Q9BSH3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NICN1Q9BSH3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.3□□□□□ -0.12
NICN1Q9BSH3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NICN1Q9BSH3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NICN1Q9BSH3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.3□□□□□ -0.12
NICN1Q9BSH3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NICN1Q9BSH3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NICN1Q9BSH3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 ABCD1P5-201ENST00000445663 754 ntBASIC14.29□□□□□ -0.12
NICN1Q9BSH3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 AL603832.2-201ENST00000566195 2125 ntBASIC14.29□□□□□ -0.12
NICN1Q9BSH3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NICN1Q9BSH3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 AC103702.1-201ENST00000548801 2630 ntBASIC14.28□□□□□ -0.12
NICN1Q9BSH3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms