Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
LITAFQ99732 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 FAM220CP-201ENST00000395253 831 ntBASIC11.05□□□□□ -0.64
LITAFQ99732 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC11.05□□□□□ -0.64
LITAFQ99732 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC11.05□□□□□ -0.64
LITAFQ99732 KLF4P1-201ENST00000412782 1185 ntBASIC11.05□□□□□ -0.64
LITAFQ99732 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC11.05□□□□□ -0.64
LITAFQ99732 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC11.05□□□□□ -0.64
LITAFQ99732 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC11.05□□□□□ -0.64
LITAFQ99732 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.05□□□□□ -0.64
LITAFQ99732 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC11.05□□□□□ -0.64
LITAFQ99732 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC11.05□□□□□ -0.64
LITAFQ99732 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC11.05□□□□□ -0.64
LITAFQ99732 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC11.05□□□□□ -0.64
LITAFQ99732 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC11.05□□□□□ -0.64
LITAFQ99732 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
LITAFQ99732 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC11.05□□□□□ -0.64
LITAFQ99732 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC11.05□□□□□ -0.64
LITAFQ99732 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
LITAFQ99732 AP000525.1-201ENST00000608286 694 ntBASIC11.05□□□□□ -0.64
LITAFQ99732 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
LITAFQ99732 PGM5P2-202ENST00000637225 1043 ntBASIC11.05□□□□□ -0.64
LITAFQ99732 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC11.05□□□□□ -0.64
LITAFQ99732 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
LITAFQ99732 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC11.05□□□□□ -0.64
LITAFQ99732 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
LITAFQ99732 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC11.05□□□□□ -0.64
LITAFQ99732 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
LITAFQ99732 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC11.05□□□□□ -0.64
LITAFQ99732 AC013726.1-201ENST00000563747 2285 ntBASIC11.05□□□□□ -0.64
LITAFQ99732 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
LITAFQ99732 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
LITAFQ99732 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
LITAFQ99732 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC11.04□□□□□ -0.64
LITAFQ99732 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC11.04□□□□□ -0.64
LITAFQ99732 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC11.04□□□□□ -0.64
LITAFQ99732 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
LITAFQ99732 GSN-215ENST00000545652 2428 ntTSL 2 BASIC11.04□□□□□ -0.64
LITAFQ99732 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC11.04□□□□□ -0.64
LITAFQ99732 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
LITAFQ99732 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
LITAFQ99732 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC11.04□□□□□ -0.64
LITAFQ99732 ACTG1P4-201ENST00000425123 1122 ntBASIC11.04□□□□□ -0.64
LITAFQ99732 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
LITAFQ99732 NUS1P1-201ENST00000446295 882 ntBASIC11.04□□□□□ -0.64
LITAFQ99732 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC11.04□□□□□ -0.64
LITAFQ99732 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC11.04□□□□□ -0.64
LITAFQ99732 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC11.04□□□□□ -0.64
LITAFQ99732 AP003071.4-201ENST00000562276 1284 ntBASIC11.04□□□□□ -0.64
LITAFQ99732 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC11.04□□□□□ -0.64
LITAFQ99732 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC11.04□□□□□ -0.64
LITAFQ99732 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 AC010654.1-201ENST00000615722 808 ntBASIC11.04□□□□□ -0.64
LITAFQ99732 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC11.04□□□□□ -0.64
LITAFQ99732 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC11.04□□□□□ -0.64
LITAFQ99732 AL049637.2-201ENST00000641778 930 ntBASIC11.04□□□□□ -0.64
LITAFQ99732 AC091951.1-201ENST00000512854 2465 ntBASIC11.04□□□□□ -0.64
LITAFQ99732 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 LOX-206ENST00000639739 1626 ntTSL 5 BASIC11.04□□□□□ -0.64
LITAFQ99732 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LITAFQ99732 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC11.04□□□□□ -0.64
LITAFQ99732 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC11.04□□□□□ -0.64
LITAFQ99732 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC11.04□□□□□ -0.64
LITAFQ99732 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
LITAFQ99732 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms