Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
PKP4Q99569 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PKP4Q99569 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PKP4Q99569 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.15■□□□□ 0.18
PKP4Q99569 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PKP4Q99569 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PKP4Q99569 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PKP4Q99569 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.15■□□□□ 0.18
PKP4Q99569 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PKP4Q99569 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PKP4Q99569 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.15■□□□□ 0.18
PKP4Q99569 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.15■□□□□ 0.18
PKP4Q99569 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PKP4Q99569 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
PKP4Q99569 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
PKP4Q99569 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
PKP4Q99569 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
PKP4Q99569 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PKP4Q99569 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PKP4Q99569 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PKP4Q99569 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PKP4Q99569 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
PKP4Q99569 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PKP4Q99569 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PKP4Q99569 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
PKP4Q99569 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PKP4Q99569 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PKP4Q99569 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PKP4Q99569 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PKP4Q99569 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PKP4Q99569 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.14■□□□□ 0.17
PKP4Q99569 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PKP4Q99569 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.14■□□□□ 0.17
PKP4Q99569 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.14■□□□□ 0.17
PKP4Q99569 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.14■□□□□ 0.17
PKP4Q99569 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.14■□□□□ 0.17
PKP4Q99569 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.14■□□□□ 0.17
PKP4Q99569 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.14■□□□□ 0.17
PKP4Q99569 ME2P1-201ENST00000426028 1970 ntBASIC16.14■□□□□ 0.17
PKP4Q99569 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.14■□□□□ 0.17
PKP4Q99569 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PKP4Q99569 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PKP4Q99569 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PKP4Q99569 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.14■□□□□ 0.17
PKP4Q99569 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PKP4Q99569 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.14■□□□□ 0.17
PKP4Q99569 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.14■□□□□ 0.17
PKP4Q99569 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PKP4Q99569 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PKP4Q99569 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.14■□□□□ 0.17
PKP4Q99569 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PKP4Q99569 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.13■□□□□ 0.17
PKP4Q99569 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PKP4Q99569 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PKP4Q99569 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PKP4Q99569 PCDHB19P-201ENST00000570871 2371 ntBASIC16.13■□□□□ 0.17
PKP4Q99569 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PKP4Q99569 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.13■□□□□ 0.17
PKP4Q99569 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PKP4Q99569 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PKP4Q99569 AL662844.4-201ENST00000606367 2838 ntBASIC16.13■□□□□ 0.17
PKP4Q99569 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.13■□□□□ 0.17
PKP4Q99569 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.13■□□□□ 0.17
PKP4Q99569 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PKP4Q99569 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PKP4Q99569 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PKP4Q99569 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.13■□□□□ 0.17
PKP4Q99569 AC002347.1-201ENST00000569543 541 ntBASIC16.13■□□□□ 0.17
PKP4Q99569 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.13■□□□□ 0.17
PKP4Q99569 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.13■□□□□ 0.17
PKP4Q99569 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.13■□□□□ 0.17
PKP4Q99569 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PKP4Q99569 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.13■□□□□ 0.17
PKP4Q99569 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.13■□□□□ 0.17
PKP4Q99569 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PKP4Q99569 PCGF3-213ENST00000620529 1899 ntBASIC16.13■□□□□ 0.17
PKP4Q99569 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.13■□□□□ 0.17
PKP4Q99569 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.13■□□□□ 0.17
PKP4Q99569 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PKP4Q99569 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PKP4Q99569 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PKP4Q99569 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PKP4Q99569 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PKP4Q99569 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PKP4Q99569 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PKP4Q99569 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PKP4Q99569 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
PKP4Q99569 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PKP4Q99569 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PKP4Q99569 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PKP4Q99569 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PKP4Q99569 AC018695.7-201ENST00000624587 2492 ntBASIC16.12■□□□□ 0.17
PKP4Q99569 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PKP4Q99569 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.12■□□□□ 0.17
PKP4Q99569 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PKP4Q99569 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.12■□□□□ 0.17
PKP4Q99569 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.12■□□□□ 0.17
PKP4Q99569 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
PKP4Q99569 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
PKP4Q99569 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms