Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AL671710.1-201ENST00000610245 2349 ntBASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 BOLA2P3-201ENST00000404566 256 ntBASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 KRT18P34-201ENST00000488218 1270 ntBASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 AC092171.3-201ENST00000610122 2651 ntBASIC13.94□□□□□ -0.18
CSMD1Q96PZ7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 RPL17P11-201ENST00000417593 544 ntBASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 AL627389.1-201ENST00000413508 1182 ntBASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 FAM21FP-201ENST00000426241 1131 ntBASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 AC114501.2-201ENST00000439631 535 ntBASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 AL022328.1-201ENST00000610050 478 ntBASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 FLJ13224-201ENST00000313737 1514 ntBASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.93□□□□□ -0.18
CSMD1Q96PZ7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 MIR33B-201ENST00000385104 96 ntBASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 HLA-H-201ENST00000383620 1096 ntBASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 NUS1P3-201ENST00000423502 862 ntBASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 MIR7845-201ENST00000618396 99 ntBASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms