Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 PMPCAP1-201ENST00000508114 1576 ntBASIC14.31□□□□□ -0.12
CMTM3Q96MX0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CMTM3Q96MX0 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 AL109954.1-202ENST00000564051 2148 ntBASIC14.3□□□□□ -0.12
CMTM3Q96MX0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 AL592071.1-201ENST00000611956 408 ntBASIC14.3□□□□□ -0.12
CMTM3Q96MX0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 AC124864.1-201ENST00000623408 392 ntBASIC14.3□□□□□ -0.12
CMTM3Q96MX0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMTM3Q96MX0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CMTM3Q96MX0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CMTM3Q96MX0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CMTM3Q96MX0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CMTM3Q96MX0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
CMTM3Q96MX0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CMTM3Q96MX0 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CMTM3Q96MX0 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.29□□□□□ -0.12
CMTM3Q96MX0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CMTM3Q96MX0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CMTM3Q96MX0 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms