Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 BASP1P1-201ENST00000430708 665 ntBASIC16.47■□□□□ 0.23
ARRDC3Q96B67 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 PCGF3-213ENST00000620529 1899 ntBASIC16.47■□□□□ 0.23
ARRDC3Q96B67 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ARRDC3Q96B67 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
ARRDC3Q96B67 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
ARRDC3Q96B67 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
ARRDC3Q96B67 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ARRDC3Q96B67 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 AL589702.1-201ENST00000641229 1509 ntBASIC16.45■□□□□ 0.22
ARRDC3Q96B67 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 AL035633.1-201ENST00000406139 838 ntBASIC16.45■□□□□ 0.22
ARRDC3Q96B67 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 RNA5SP421-201ENST00000516864 134 ntBASIC16.45■□□□□ 0.22
ARRDC3Q96B67 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 BANF1P1-201ENST00000553684 263 ntBASIC16.45■□□□□ 0.22
ARRDC3Q96B67 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 SPDYE12P-201ENST00000618416 771 ntBASIC16.45■□□□□ 0.22
ARRDC3Q96B67 AC073592.8-201ENST00000624126 511 ntBASIC16.45■□□□□ 0.22
ARRDC3Q96B67 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.45■□□□□ 0.22
ARRDC3Q96B67 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms