Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 HYMAI.1-201ENST00000620949 238 ntBASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.52■□□□□ 0.23
CKAP2Q8WWK9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CKAP2Q8WWK9 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CKAP2Q8WWK9 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.23
CKAP2Q8WWK9 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CKAP2Q8WWK9 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CKAP2Q8WWK9 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CKAP2Q8WWK9 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CKAP2Q8WWK9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CKAP2Q8WWK9 AC020658.6-201ENST00000623564 1870 ntBASIC16.52■□□□□ 0.23
CKAP2Q8WWK9 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CKAP2Q8WWK9 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CKAP2Q8WWK9 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CKAP2Q8WWK9 PMPCAP1-201ENST00000508114 1576 ntBASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 AL109954.1-202ENST00000564051 2148 ntBASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 MIR4492-201ENST00000581627 80 ntBASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 AC010654.1-201ENST00000615722 808 ntBASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 GPAA1P2-202ENST00000606848 1787 ntBASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 TOP3BP1-201ENST00000420768 1380 ntBASIC16.51■□□□□ 0.23
CKAP2Q8WWK9 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 AL020989.1-201ENST00000422979 469 ntBASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 AC010203.1-204ENST00000548782 407 ntBASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms