Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 AL512652.2-201ENST00000625156 1716 ntBASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 HBZP1-201ENST00000354915 429 ntBASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 AD001527.2-201ENST00000622994 785 ntBASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 AL031432.5-201ENST00000641059 760 ntBASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 AP003680.1-201ENST00000598970 3660 ntBASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNIH3Q8TBE1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CNIH3Q8TBE1 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.21■□□□□ 0.02
CNIH3Q8TBE1 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CNIH3Q8TBE1 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CNIH3Q8TBE1 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CNIH3Q8TBE1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CNIH3Q8TBE1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CNIH3Q8TBE1 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CNIH3Q8TBE1 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CNIH3Q8TBE1 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CNIH3Q8TBE1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 COX11P1-201ENST00000489116 835 ntBASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.2■□□□□ 0.02
CNIH3Q8TBE1 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 AL845331.1-201ENST00000424978 1190 ntBASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 ACTG1P4-201ENST00000425123 1122 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms