Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 AL161645.1-201ENST00000622716 1255 ntBASIC17.54■□□□□ 0.4
UBA3Q8TBC4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA3Q8TBC4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 PCGF3-213ENST00000620529 1899 ntBASIC17.53■□□□□ 0.4
UBA3Q8TBC4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 CEND1P1-201ENST00000451006 455 ntBASIC17.53■□□□□ 0.4
UBA3Q8TBC4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 MIR4469-201ENST00000583919 79 ntBASIC17.53■□□□□ 0.4
UBA3Q8TBC4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBA3Q8TBC4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBA3Q8TBC4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.52■□□□□ 0.4
UBA3Q8TBC4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBA3Q8TBC4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBA3Q8TBC4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBA3Q8TBC4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBA3Q8TBC4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBA3Q8TBC4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms