Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.54■□□□□ 0.72
NKX2-3Q8TAU0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-3Q8TAU0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.54■□□□□ 0.72
NKX2-3Q8TAU0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-3Q8TAU0 CRB3P1-201ENST00000449338 276 ntBASIC19.54■□□□□ 0.72
NKX2-3Q8TAU0 UGT1A2P-201ENST00000454886 866 ntBASIC19.54■□□□□ 0.72
NKX2-3Q8TAU0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-3Q8TAU0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-3Q8TAU0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.54■□□□□ 0.72
NKX2-3Q8TAU0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.54■□□□□ 0.72
NKX2-3Q8TAU0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.54■□□□□ 0.72
NKX2-3Q8TAU0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.54■□□□□ 0.72
NKX2-3Q8TAU0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-3Q8TAU0 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.54■□□□□ 0.72
NKX2-3Q8TAU0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-3Q8TAU0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-3Q8TAU0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
NKX2-3Q8TAU0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.54■□□□□ 0.72
NKX2-3Q8TAU0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.54■□□□□ 0.72
NKX2-3Q8TAU0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-3Q8TAU0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-3Q8TAU0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.54■□□□□ 0.72
NKX2-3Q8TAU0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX2-3Q8TAU0 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 KRT18P32-201ENST00000424695 1287 ntBASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 GPS2P2-201ENST00000430745 888 ntBASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 AL592309.1-201ENST00000443127 649 ntBASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 RN7SL589P-201ENST00000481268 310 ntBASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 AC125807.1-201ENST00000483097 614 ntBASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 AP002490.2-201ENST00000524791 560 ntBASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 SLC25A39P2-201ENST00000537614 270 ntBASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 AC140878.1-201ENST00000565277 250 ntBASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NKX2-3Q8TAU0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NKX2-3Q8TAU0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NKX2-3Q8TAU0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NKX2-3Q8TAU0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NKX2-3Q8TAU0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
NKX2-3Q8TAU0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NKX2-3Q8TAU0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NKX2-3Q8TAU0 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
NKX2-3Q8TAU0 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
NKX2-3Q8TAU0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.52■□□□□ 0.72
NKX2-3Q8TAU0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.52■□□□□ 0.72
NKX2-3Q8TAU0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.52■□□□□ 0.72
NKX2-3Q8TAU0 AC022494.1-201ENST00000466044 728 ntBASIC19.52■□□□□ 0.72
NKX2-3Q8TAU0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NKX2-3Q8TAU0 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.52■□□□□ 0.72
NKX2-3Q8TAU0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.52■□□□□ 0.72
NKX2-3Q8TAU0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.52■□□□□ 0.72
NKX2-3Q8TAU0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.52■□□□□ 0.72
NKX2-3Q8TAU0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NKX2-3Q8TAU0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
NKX2-3Q8TAU0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
NKX2-3Q8TAU0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
NKX2-3Q8TAU0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NKX2-3Q8TAU0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
NKX2-3Q8TAU0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NKX2-3Q8TAU0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.52■□□□□ 0.71
NKX2-3Q8TAU0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.52■□□□□ 0.71
NKX2-3Q8TAU0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NKX2-3Q8TAU0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms