Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 SLC4A1AP-201ENST00000326019 2959 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 AC106865.1-201ENST00000602666 3034 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 AP2A1-201ENST00000354293 3388 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 ACCS-201ENST00000263776 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 FOSB-210ENST00000591858 3658 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 BAIAP3-215ENST00000568887 3763 ntTSL 2 BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 WBP2-203ENST00000433525 928 ntTSL 2 BASIC10.21□□□□□ -0.77
SVIPQ8NHG7 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
SVIPQ8NHG7 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC10.21□□□□□ -0.78
SVIPQ8NHG7 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SVIPQ8NHG7 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SVIPQ8NHG7 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SVIPQ8NHG7 ADGRE5-201ENST00000242786 3188 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SVIPQ8NHG7 PEX5-202ENST00000266564 3170 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SVIPQ8NHG7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SVIPQ8NHG7 AC004687.1-201ENST00000579003 1625 ntBASIC10.21□□□□□ -0.78
SVIPQ8NHG7 AC022113.1-201ENST00000499131 1674 ntTSL 2 BASIC10.21□□□□□ -0.78
SVIPQ8NHG7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SVIPQ8NHG7 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SVIPQ8NHG7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SVIPQ8NHG7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC10.21□□□□□ -0.78
SVIPQ8NHG7 FUT8-204ENST00000394586 3559 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SVIPQ8NHG7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
SVIPQ8NHG7 AC004148.2-201ENST00000575890 1938 ntTSL 5 BASIC10.21□□□□□ -0.78
SVIPQ8NHG7 CD36-208ENST00000433696 1985 ntTSL 5 BASIC10.21□□□□□ -0.78
SVIPQ8NHG7 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
SVIPQ8NHG7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SVIPQ8NHG7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
SVIPQ8NHG7 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 SVEP1-201ENST00000374461 3257 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 ARL4C-201ENST00000339728 3385 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 LINC01940-201ENST00000455228 3489 ntTSL 2 BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 AC111200.1-201ENST00000358778 657 ntBASIC10.2□□□□□ -0.78
SVIPQ8NHG7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 IRF5-208ENST00000473745 2282 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 AC117529.1-201ENST00000505789 2023 ntBASIC10.2□□□□□ -0.78
SVIPQ8NHG7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 AC092720.1-201ENST00000562466 447 ntTSL 5 BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 AC113208.3-201ENST00000637356 2523 ntBASIC10.2□□□□□ -0.78
SVIPQ8NHG7 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 PCSK9-201ENST00000302118 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 WDR6-207ENST00000448293 3377 ntTSL 2 BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 AL353625.1-201ENST00000569097 3131 ntBASIC10.2□□□□□ -0.78
SVIPQ8NHG7 EPS15L1-203ENST00000535753 2666 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SVIPQ8NHG7 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC10.19□□□□□ -0.78
SVIPQ8NHG7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
SVIPQ8NHG7 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SVIPQ8NHG7 PARP8-220ENST00000514342 2384 ntTSL 5 BASIC10.19□□□□□ -0.78
SVIPQ8NHG7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SVIPQ8NHG7 AC073957.3-201ENST00000609998 6758 ntBASIC10.19□□□□□ -0.78
SVIPQ8NHG7 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SVIPQ8NHG7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SVIPQ8NHG7 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC10.19□□□□□ -0.78
SVIPQ8NHG7 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
SVIPQ8NHG7 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC10.19□□□□□ -0.78
SVIPQ8NHG7 PFKFB3-205ENST00000379789 4157 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SVIPQ8NHG7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC10.19□□□□□ -0.78
SVIPQ8NHG7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SVIPQ8NHG7 HLA-A-202ENST00000376806 1854 ntBASIC10.19□□□□□ -0.78
SVIPQ8NHG7 AC005165.1-201ENST00000446840 1870 ntTSL 2 BASIC10.19□□□□□ -0.78
SVIPQ8NHG7 AL133325.3-201ENST00000622757 3674 ntBASIC10.19□□□□□ -0.78
SVIPQ8NHG7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SVIPQ8NHG7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
SVIPQ8NHG7 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SVIPQ8NHG7 HADH-202ENST00000403312 1752 ntTSL 5 BASIC10.19□□□□□ -0.78
SVIPQ8NHG7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms