Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 AC004790.2-201ENST00000623588 572 ntBASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC83Q8IWF9 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC83Q8IWF9 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.52■□□□□ 0.71
CCDC83Q8IWF9 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC83Q8IWF9 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC83Q8IWF9 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CCDC83Q8IWF9 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC83Q8IWF9 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
CCDC83Q8IWF9 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC83Q8IWF9 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC83Q8IWF9 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC83Q8IWF9 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC83Q8IWF9 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.52■□□□□ 0.71
CCDC83Q8IWF9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 AP001350.2-201ENST00000625104 1094 ntBASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC83Q8IWF9 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 AF186996.4-201ENST00000467186 377 ntBASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 AC117500.6-201ENST00000624871 588 ntBASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 AC005593.1-201ENST00000624894 515 ntBASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 FAM215A-202ENST00000632077 792 ntBASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC83Q8IWF9 AC010491.1-201ENST00000563101 2797 ntBASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms