Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 KRT18P67-201ENST00000432816 1264 ntBASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 AC008667.4-201ENST00000607370 168 ntBASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 AL691432.3-201ENST00000621860 400 ntBASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 AL353732.1-201ENST00000569618 1459 ntBASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 CICP6-201ENST00000457191 2729 ntBASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 GGT4P-201ENST00000623672 1708 ntBASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 RN7SL510P-201ENST00000581311 263 ntBASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 AC005593.1-201ENST00000624894 515 ntBASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00346Q8IVM7 AL513523.2-202ENST00000427283 2040 ntBASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms