Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 AL121761.2-201ENST00000598007 1648 ntBASIC11.07□□□□□ -0.64
SCXQ7RTU7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 RPSAP43-201ENST00000402237 625 ntBASIC11.07□□□□□ -0.64
SCXQ7RTU7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 AC023274.1-201ENST00000418278 595 ntBASIC11.07□□□□□ -0.64
SCXQ7RTU7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 DDX43P3-201ENST00000441064 443 ntBASIC11.07□□□□□ -0.64
SCXQ7RTU7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 IGHV3-52-201ENST00000519770 353 ntBASIC11.07□□□□□ -0.64
SCXQ7RTU7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 MIR4751-201ENST00000578027 74 ntBASIC11.07□□□□□ -0.64
SCXQ7RTU7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC11.07□□□□□ -0.64
SCXQ7RTU7 AC055717.3-201ENST00000622967 595 ntBASIC11.07□□□□□ -0.64
SCXQ7RTU7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 AC006504.4-201ENST00000592118 1568 ntBASIC11.07□□□□□ -0.64
SCXQ7RTU7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCXQ7RTU7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
SCXQ7RTU7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 AP002414.2-201ENST00000591780 3365 ntBASIC11.06□□□□□ -0.64
SCXQ7RTU7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms