Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.74■□□□□ 0.27
RAPH1Q70E73 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAPH1Q70E73 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAPH1Q70E73 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.74■□□□□ 0.27
RAPH1Q70E73 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.74■□□□□ 0.27
RAPH1Q70E73 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
RAPH1Q70E73 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAPH1Q70E73 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAPH1Q70E73 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RAPH1Q70E73 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAPH1Q70E73 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAPH1Q70E73 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RAPH1Q70E73 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAPH1Q70E73 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.74■□□□□ 0.27
RAPH1Q70E73 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RAPH1Q70E73 MTDHP3-201ENST00000594186 672 ntBASIC16.74■□□□□ 0.27
RAPH1Q70E73 AC013467.2-201ENST00000605472 835 ntBASIC16.74■□□□□ 0.27
RAPH1Q70E73 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.74■□□□□ 0.27
RAPH1Q70E73 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RAPH1Q70E73 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.74■□□□□ 0.27
RAPH1Q70E73 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAPH1Q70E73 ME2P1-201ENST00000426028 1970 ntBASIC16.74■□□□□ 0.27
RAPH1Q70E73 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAPH1Q70E73 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAPH1Q70E73 AC067930.6-201ENST00000623257 4947 ntBASIC16.74■□□□□ 0.27
RAPH1Q70E73 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAPH1Q70E73 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAPH1Q70E73 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RAPH1Q70E73 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAPH1Q70E73 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAPH1Q70E73 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAPH1Q70E73 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.74■□□□□ 0.27
RAPH1Q70E73 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RAPH1Q70E73 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RAPH1Q70E73 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAPH1Q70E73 AC024909.3-201ENST00000611513 2257 ntBASIC16.73■□□□□ 0.27
RAPH1Q70E73 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAPH1Q70E73 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.73■□□□□ 0.27
RAPH1Q70E73 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAPH1Q70E73 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAPH1Q70E73 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAPH1Q70E73 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAPH1Q70E73 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAPH1Q70E73 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAPH1Q70E73 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAPH1Q70E73 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAPH1Q70E73 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAPH1Q70E73 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAPH1Q70E73 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.73■□□□□ 0.27
RAPH1Q70E73 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAPH1Q70E73 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAPH1Q70E73 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAPH1Q70E73 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.73■□□□□ 0.27
RAPH1Q70E73 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAPH1Q70E73 RBM17P3-201ENST00000417687 1192 ntBASIC16.73■□□□□ 0.27
RAPH1Q70E73 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.73■□□□□ 0.27
RAPH1Q70E73 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.73■□□□□ 0.27
RAPH1Q70E73 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAPH1Q70E73 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAPH1Q70E73 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.73■□□□□ 0.27
RAPH1Q70E73 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.73■□□□□ 0.27
RAPH1Q70E73 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RAPH1Q70E73 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.73■□□□□ 0.27
RAPH1Q70E73 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.73■□□□□ 0.27
RAPH1Q70E73 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAPH1Q70E73 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.73■□□□□ 0.27
RAPH1Q70E73 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAPH1Q70E73 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RAPH1Q70E73 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.73■□□□□ 0.27
RAPH1Q70E73 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RAPH1Q70E73 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.73■□□□□ 0.27
RAPH1Q70E73 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAPH1Q70E73 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
RAPH1Q70E73 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.73■□□□□ 0.27
RAPH1Q70E73 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms