Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCAPQ12770 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.08■□□□□ 0.32
SCAPQ12770 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCAPQ12770 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SCAPQ12770 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCAPQ12770 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SCAPQ12770 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.08■□□□□ 0.32
SCAPQ12770 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.08■□□□□ 0.32
SCAPQ12770 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.08■□□□□ 0.32
SCAPQ12770 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SCAPQ12770 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCAPQ12770 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAPQ12770 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCAPQ12770 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.07■□□□□ 0.32
SCAPQ12770 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCAPQ12770 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAPQ12770 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
SCAPQ12770 PCDHB19P-201ENST00000570871 2371 ntBASIC17.07■□□□□ 0.32
SCAPQ12770 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SCAPQ12770 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.07■□□□□ 0.32
SCAPQ12770 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCAPQ12770 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAPQ12770 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCAPQ12770 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCAPQ12770 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.07■□□□□ 0.32
SCAPQ12770 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.07■□□□□ 0.32
SCAPQ12770 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.07■□□□□ 0.32
SCAPQ12770 AL671277.1-201ENST00000429656 993 ntBASIC17.07■□□□□ 0.32
SCAPQ12770 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.07■□□□□ 0.32
SCAPQ12770 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCAPQ12770 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
SCAPQ12770 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.07■□□□□ 0.32
SCAPQ12770 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.07■□□□□ 0.32
SCAPQ12770 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.07■□□□□ 0.32
SCAPQ12770 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.07■□□□□ 0.32
SCAPQ12770 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.07■□□□□ 0.32
SCAPQ12770 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAPQ12770 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
SCAPQ12770 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAPQ12770 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.07■□□□□ 0.32
SCAPQ12770 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAPQ12770 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAPQ12770 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SCAPQ12770 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCAPQ12770 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAPQ12770 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.07■□□□□ 0.32
SCAPQ12770 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SCAPQ12770 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.06■□□□□ 0.32
SCAPQ12770 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAPQ12770 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SCAPQ12770 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAPQ12770 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCAPQ12770 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SCAPQ12770 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAPQ12770 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAPQ12770 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAPQ12770 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.06■□□□□ 0.32
SCAPQ12770 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAPQ12770 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.06■□□□□ 0.32
SCAPQ12770 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
SCAPQ12770 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.06■□□□□ 0.32
SCAPQ12770 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
SCAPQ12770 RN7SL589P-201ENST00000481268 310 ntBASIC17.06■□□□□ 0.32
SCAPQ12770 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAPQ12770 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SCAPQ12770 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SCAPQ12770 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
SCAPQ12770 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.06■□□□□ 0.32
SCAPQ12770 AL135744.1-201ENST00000565098 629 ntBASIC17.06■□□□□ 0.32
SCAPQ12770 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.06■□□□□ 0.32
SCAPQ12770 AC073389.1-201ENST00000595595 795 ntBASIC17.06■□□□□ 0.32
SCAPQ12770 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.06■□□□□ 0.32
SCAPQ12770 AC093028.1-201ENST00000622998 982 ntBASIC17.06■□□□□ 0.32
SCAPQ12770 AC073439.1-201ENST00000624121 1774 ntBASIC17.06■□□□□ 0.32
SCAPQ12770 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SCAPQ12770 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAPQ12770 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAPQ12770 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SCAPQ12770 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.06■□□□□ 0.32
SCAPQ12770 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SCAPQ12770 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAPQ12770 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.06■□□□□ 0.32
SCAPQ12770 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCAPQ12770 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.05■□□□□ 0.32
SCAPQ12770 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.05■□□□□ 0.32
SCAPQ12770 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.05■□□□□ 0.32
SCAPQ12770 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.05■□□□□ 0.32
SCAPQ12770 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SCAPQ12770 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAPQ12770 CYP2T1P-202ENST00000641596 2535 ntBASIC17.05■□□□□ 0.32
SCAPQ12770 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.05■□□□□ 0.32
SCAPQ12770 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCAPQ12770 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAPQ12770 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAPQ12770 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAPQ12770 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.05■□□□□ 0.32
SCAPQ12770 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAPQ12770 TFAMP1-201ENST00000412727 736 ntBASIC17.05■□□□□ 0.32
SCAPQ12770 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCAPQ12770 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms