Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC21.88■■□□□ 1.09
COL16A1Q07092 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC21.88■■□□□ 1.09
COL16A1Q07092 AP001063.1-201ENST00000568332 529 ntBASIC21.88■■□□□ 1.09
COL16A1Q07092 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.87■■□□□ 1.09
COL16A1Q07092 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL16A1Q07092 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL16A1Q07092 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.87■■□□□ 1.09
COL16A1Q07092 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
COL16A1Q07092 RERG-209ENST00000546331 1383 ntTSL 2 BASIC21.87■■□□□ 1.09
COL16A1Q07092 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL16A1Q07092 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL16A1Q07092 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC21.87■■□□□ 1.09
COL16A1Q07092 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL16A1Q07092 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
COL16A1Q07092 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL16A1Q07092 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL16A1Q07092 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC21.87■■□□□ 1.09
COL16A1Q07092 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC21.87■■□□□ 1.09
COL16A1Q07092 RPL13AP25-201ENST00000484130 612 ntBASIC21.87■■□□□ 1.09
COL16A1Q07092 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL16A1Q07092 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC21.87■■□□□ 1.09
COL16A1Q07092 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
COL16A1Q07092 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL16A1Q07092 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
COL16A1Q07092 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL16A1Q07092 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL16A1Q07092 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL16A1Q07092 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
COL16A1Q07092 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL16A1Q07092 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL16A1Q07092 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
COL16A1Q07092 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL16A1Q07092 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL16A1Q07092 AL138781.2-201ENST00000617896 1843 ntBASIC21.86■■□□□ 1.09
COL16A1Q07092 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
COL16A1Q07092 KRTAP10-13P-201ENST00000412914 571 ntBASIC21.86■■□□□ 1.09
COL16A1Q07092 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
COL16A1Q07092 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL16A1Q07092 EEF1DP1-201ENST00000585891 896 ntBASIC21.86■■□□□ 1.09
COL16A1Q07092 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL16A1Q07092 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
COL16A1Q07092 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.86■■□□□ 1.09
COL16A1Q07092 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC21.86■■□□□ 1.09
COL16A1Q07092 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL16A1Q07092 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.86■■□□□ 1.09
COL16A1Q07092 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL16A1Q07092 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.86■■□□□ 1.09
COL16A1Q07092 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL16A1Q07092 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL16A1Q07092 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
COL16A1Q07092 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL16A1Q07092 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.85■■□□□ 1.09
COL16A1Q07092 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL16A1Q07092 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC21.85■■□□□ 1.09
COL16A1Q07092 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
COL16A1Q07092 HLA-DQB2-229ENST00000411527 1059 ntBASIC21.85■■□□□ 1.09
COL16A1Q07092 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL16A1Q07092 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL16A1Q07092 AC078819.1-201ENST00000547454 765 ntBASIC21.85■■□□□ 1.09
COL16A1Q07092 AC012085.1-201ENST00000548270 765 ntBASIC21.85■■□□□ 1.09
COL16A1Q07092 AC023310.1-201ENST00000554836 735 ntBASIC21.85■■□□□ 1.09
COL16A1Q07092 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC21.85■■□□□ 1.09
COL16A1Q07092 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC21.85■■□□□ 1.09
COL16A1Q07092 AC138951.2-201ENST00000623455 1161 ntBASIC21.85■■□□□ 1.09
COL16A1Q07092 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL16A1Q07092 AC016396.2-201ENST00000562575 1417 ntBASIC21.85■■□□□ 1.09
COL16A1Q07092 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL16A1Q07092 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.85■■□□□ 1.09
COL16A1Q07092 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC21.85■■□□□ 1.09
COL16A1Q07092 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL16A1Q07092 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL16A1Q07092 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL16A1Q07092 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
COL16A1Q07092 C2orf27AP3-201ENST00000434123 579 ntBASIC21.84■■□□□ 1.09
COL16A1Q07092 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL16A1Q07092 AC008267.1-201ENST00000474858 1069 ntBASIC21.84■■□□□ 1.09
COL16A1Q07092 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC21.84■■□□□ 1.09
COL16A1Q07092 AL354718.3-201ENST00000616414 581 ntBASIC21.84■■□□□ 1.09
COL16A1Q07092 AP001505.2-201ENST00000616815 443 ntBASIC21.84■■□□□ 1.09
COL16A1Q07092 CR382287.1-201ENST00000623954 586 ntBASIC21.84■■□□□ 1.09
COL16A1Q07092 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL16A1Q07092 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL16A1Q07092 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL16A1Q07092 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC21.84■■□□□ 1.09
COL16A1Q07092 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.84■■□□□ 1.09
COL16A1Q07092 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.84■■□□□ 1.09
COL16A1Q07092 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL16A1Q07092 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.84■■□□□ 1.09
COL16A1Q07092 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC21.84■■□□□ 1.09
COL16A1Q07092 GRN-214ENST00000589265 1632 ntTSL 5 BASIC21.84■■□□□ 1.09
COL16A1Q07092 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC21.84■■□□□ 1.09
COL16A1Q07092 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL16A1Q07092 KRTAP19-9P-201ENST00000421795 191 ntBASIC21.84■■□□□ 1.09
COL16A1Q07092 FTLP1-201ENST00000449155 526 ntBASIC21.84■■□□□ 1.09
COL16A1Q07092 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC21.84■■□□□ 1.09
COL16A1Q07092 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC21.84■■□□□ 1.09
COL16A1Q07092 AC124947.2-201ENST00000547118 1133 ntBASIC21.84■■□□□ 1.09
COL16A1Q07092 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
COL16A1Q07092 AL451050.2-201ENST00000606967 682 ntBASIC21.84■■□□□ 1.09
COL16A1Q07092 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms