Protein–RNA interactions for Protein: Q03591

CFHR1, Complement factor H-related protein 1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1Q03591 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CFHR1Q03591 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CFHR1Q03591 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFHR1Q03591 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFHR1Q03591 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.71■□□□□ 0.11
CFHR1Q03591 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.71■□□□□ 0.11
CFHR1Q03591 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CFHR1Q03591 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFHR1Q03591 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFHR1Q03591 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFHR1Q03591 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.71■□□□□ 0.11
CFHR1Q03591 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CFHR1Q03591 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
CFHR1Q03591 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CFHR1Q03591 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CFHR1Q03591 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CFHR1Q03591 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.71■□□□□ 0.11
CFHR1Q03591 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.71■□□□□ 0.11
CFHR1Q03591 AC092658.1-201ENST00000505836 891 ntBASIC15.71■□□□□ 0.11
CFHR1Q03591 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.71■□□□□ 0.11
CFHR1Q03591 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.71■□□□□ 0.11
CFHR1Q03591 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CFHR1Q03591 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.71■□□□□ 0.11
CFHR1Q03591 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.71■□□□□ 0.11
CFHR1Q03591 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.71■□□□□ 0.11
CFHR1Q03591 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.71■□□□□ 0.11
CFHR1Q03591 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.71■□□□□ 0.11
CFHR1Q03591 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.71■□□□□ 0.11
CFHR1Q03591 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.71■□□□□ 0.11
CFHR1Q03591 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.71■□□□□ 0.11
CFHR1Q03591 MIR6805-201ENST00000615055 62 ntBASIC15.71■□□□□ 0.11
CFHR1Q03591 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.71■□□□□ 0.11
CFHR1Q03591 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFHR1Q03591 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFHR1Q03591 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CFHR1Q03591 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CFHR1Q03591 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFHR1Q03591 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.71■□□□□ 0.11
CFHR1Q03591 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFHR1Q03591 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CFHR1Q03591 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.71■□□□□ 0.1
CFHR1Q03591 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CFHR1Q03591 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CFHR1Q03591 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.71■□□□□ 0.1
CFHR1Q03591 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CFHR1Q03591 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFHR1Q03591 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFHR1Q03591 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.7■□□□□ 0.1
CFHR1Q03591 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CFHR1Q03591 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFHR1Q03591 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.7■□□□□ 0.1
CFHR1Q03591 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFHR1Q03591 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFHR1Q03591 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFHR1Q03591 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CFHR1Q03591 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFHR1Q03591 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CFHR1Q03591 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFHR1Q03591 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFHR1Q03591 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CFHR1Q03591 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.7■□□□□ 0.1
CFHR1Q03591 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.7■□□□□ 0.1
CFHR1Q03591 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.7■□□□□ 0.1
CFHR1Q03591 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.7■□□□□ 0.1
CFHR1Q03591 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFHR1Q03591 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.7■□□□□ 0.1
CFHR1Q03591 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFHR1Q03591 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CFHR1Q03591 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CFHR1Q03591 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.7■□□□□ 0.1
CFHR1Q03591 AC004840.1-201ENST00000636359 365 ntBASIC15.7■□□□□ 0.1
CFHR1Q03591 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFHR1Q03591 AC138969.3-201ENST00000546612 1459 ntBASIC15.7■□□□□ 0.1
CFHR1Q03591 AC138932.2-201ENST00000548268 1459 ntBASIC15.7■□□□□ 0.1
CFHR1Q03591 AC126755.4-201ENST00000549796 1459 ntBASIC15.7■□□□□ 0.1
CFHR1Q03591 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.7■□□□□ 0.1
CFHR1Q03591 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CFHR1Q03591 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.7■□□□□ 0.1
CFHR1Q03591 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CFHR1Q03591 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.7■□□□□ 0.1
CFHR1Q03591 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CFHR1Q03591 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.69■□□□□ 0.1
CFHR1Q03591 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.69■□□□□ 0.1
CFHR1Q03591 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.69■□□□□ 0.1
CFHR1Q03591 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.69■□□□□ 0.1
CFHR1Q03591 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CFHR1Q03591 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CFHR1Q03591 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.69■□□□□ 0.1
CFHR1Q03591 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CFHR1Q03591 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CFHR1Q03591 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.69■□□□□ 0.1
CFHR1Q03591 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CFHR1Q03591 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CFHR1Q03591 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.69■□□□□ 0.1
CFHR1Q03591 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CFHR1Q03591 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CFHR1Q03591 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CFHR1Q03591 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.69■□□□□ 0.1
CFHR1Q03591 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.69■□□□□ 0.1
CFHR1Q03591 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms