Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 TUBB8P12-201ENST00000308911 1335 ntBASIC12.79□□□□□ -0.36
HIST1H1AQ02539 TUBB7P-202ENST00000428444 1305 ntBASIC12.79□□□□□ -0.36
HIST1H1AQ02539 TUBB8P7-204ENST00000567960 1332 ntBASIC12.79□□□□□ -0.36
HIST1H1AQ02539 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 ACTG1P4-201ENST00000425123 1122 ntBASIC12.78□□□□□ -0.36
HIST1H1AQ02539 ATP5G2P1-201ENST00000433580 426 ntBASIC12.78□□□□□ -0.36
HIST1H1AQ02539 NUS1P1-201ENST00000446295 882 ntBASIC12.78□□□□□ -0.36
HIST1H1AQ02539 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC12.78□□□□□ -0.36
HIST1H1AQ02539 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.77□□□□□ -0.36
HIST1H1AQ02539 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H1AQ02539 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC12.77□□□□□ -0.36
HIST1H1AQ02539 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H1AQ02539 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H1AQ02539 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.36
HIST1H1AQ02539 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H1AQ02539 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H1AQ02539 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
HIST1H1AQ02539 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
HIST1H1AQ02539 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
HIST1H1AQ02539 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
HIST1H1AQ02539 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H1AQ02539 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H1AQ02539 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.77□□□□□ -0.36
HIST1H1AQ02539 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H1AQ02539 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms