Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CL1P78423 RNF216P1-203ENST00000404404 2427 ntBASIC13.42□□□□□ -0.26
CX3CL1P78423 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CL1P78423 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.42□□□□□ -0.26
CX3CL1P78423 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CL1P78423 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CX3CL1P78423 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CX3CL1P78423 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CL1P78423 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.42□□□□□ -0.26
CX3CL1P78423 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CL1P78423 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CL1P78423 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
CX3CL1P78423 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CX3CL1P78423 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CL1P78423 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CL1P78423 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CX3CL1P78423 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CL1P78423 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CL1P78423 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CL1P78423 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.42□□□□□ -0.26
CX3CL1P78423 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
CX3CL1P78423 AC026396.1-201ENST00000419388 421 ntBASIC13.42□□□□□ -0.26
CX3CL1P78423 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.42□□□□□ -0.26
CX3CL1P78423 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
CX3CL1P78423 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.42□□□□□ -0.26
CX3CL1P78423 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.42□□□□□ -0.26
CX3CL1P78423 AC108751.1-201ENST00000490852 363 ntBASIC13.42□□□□□ -0.26
CX3CL1P78423 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
CX3CL1P78423 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.42□□□□□ -0.26
CX3CL1P78423 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.42□□□□□ -0.26
CX3CL1P78423 IGHV3-22-201ENST00000520721 359 ntBASIC13.42□□□□□ -0.26
CX3CL1P78423 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.42□□□□□ -0.26
CX3CL1P78423 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.42□□□□□ -0.26
CX3CL1P78423 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CX3CL1P78423 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.42□□□□□ -0.26
CX3CL1P78423 REXO1L3P-201ENST00000622202 1288 ntBASIC13.42□□□□□ -0.26
CX3CL1P78423 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.42□□□□□ -0.26
CX3CL1P78423 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CX3CL1P78423 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CL1P78423 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.42□□□□□ -0.26
CX3CL1P78423 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.42□□□□□ -0.26
CX3CL1P78423 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CL1P78423 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CL1P78423 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CX3CL1P78423 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CL1P78423 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CL1P78423 AC063926.3-201ENST00000624734 5658 ntBASIC13.42□□□□□ -0.26
CX3CL1P78423 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CL1P78423 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.42□□□□□ -0.26
CX3CL1P78423 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CL1P78423 AL645728.1-201ENST00000366221 2101 ntBASIC13.42□□□□□ -0.26
CX3CL1P78423 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.42□□□□□ -0.26
CX3CL1P78423 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.42□□□□□ -0.26
CX3CL1P78423 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CL1P78423 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CL1P78423 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CX3CL1P78423 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CL1P78423 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CL1P78423 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CX3CL1P78423 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CX3CL1P78423 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CL1P78423 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CL1P78423 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CL1P78423 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CL1P78423 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CL1P78423 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.41□□□□□ -0.26
CX3CL1P78423 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CL1P78423 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.41□□□□□ -0.26
CX3CL1P78423 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.41□□□□□ -0.26
CX3CL1P78423 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
CX3CL1P78423 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CX3CL1P78423 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CL1P78423 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CX3CL1P78423 CYP2T1P-202ENST00000641596 2535 ntBASIC13.41□□□□□ -0.26
CX3CL1P78423 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.41□□□□□ -0.26
CX3CL1P78423 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CL1P78423 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CL1P78423 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CL1P78423 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CL1P78423 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.41□□□□□ -0.26
CX3CL1P78423 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.41□□□□□ -0.26
CX3CL1P78423 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CX3CL1P78423 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.41□□□□□ -0.26
CX3CL1P78423 RNA5SP415-201ENST00000517246 115 ntBASIC13.41□□□□□ -0.26
CX3CL1P78423 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.41□□□□□ -0.26
CX3CL1P78423 UNC93B6-202ENST00000528242 690 ntBASIC13.41□□□□□ -0.26
CX3CL1P78423 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
CX3CL1P78423 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.41□□□□□ -0.26
CX3CL1P78423 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.41□□□□□ -0.26
CX3CL1P78423 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CL1P78423 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CL1P78423 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.41□□□□□ -0.26
CX3CL1P78423 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CL1P78423 AL391256.1-201ENST00000443260 1855 ntBASIC13.41□□□□□ -0.26
CX3CL1P78423 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.41□□□□□ -0.26
CX3CL1P78423 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.41□□□□□ -0.26
CX3CL1P78423 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.41□□□□□ -0.26
CX3CL1P78423 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CL1P78423 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.41□□□□□ -0.26
CX3CL1P78423 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms