Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
CXCR4P61073 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CXCR4P61073 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CXCR4P61073 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.16■□□□□ 0.02
CXCR4P61073 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.16■□□□□ 0.02
CXCR4P61073 SSR4P1-203ENST00000599569 2260 ntBASIC15.15■□□□□ 0.02
CXCR4P61073 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.15■□□□□ 0.02
CXCR4P61073 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CXCR4P61073 LINC01144-201ENST00000626198 1710 ntBASIC15.15■□□□□ 0.02
CXCR4P61073 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CXCR4P61073 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CXCR4P61073 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CXCR4P61073 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CXCR4P61073 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CXCR4P61073 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CXCR4P61073 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CXCR4P61073 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CXCR4P61073 MIR648-201ENST00000385046 94 ntBASIC15.15■□□□□ 0.02
CXCR4P61073 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CXCR4P61073 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.15■□□□□ 0.02
CXCR4P61073 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CXCR4P61073 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.15■□□□□ 0.02
CXCR4P61073 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CXCR4P61073 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.15■□□□□ 0.02
CXCR4P61073 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.15■□□□□ 0.02
CXCR4P61073 AC011467.2-201ENST00000598425 242 ntBASIC15.15■□□□□ 0.02
CXCR4P61073 AC073592.5-201ENST00000624854 528 ntBASIC15.15■□□□□ 0.02
CXCR4P61073 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CXCR4P61073 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.15■□□□□ 0.02
CXCR4P61073 NFIC-211ENST00000641145 8399 ntBASIC15.15■□□□□ 0.02
CXCR4P61073 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CXCR4P61073 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CXCR4P61073 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CXCR4P61073 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CXCR4P61073 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CXCR4P61073 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CXCR4P61073 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CXCR4P61073 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CXCR4P61073 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CXCR4P61073 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.15■□□□□ 0.02
CXCR4P61073 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CXCR4P61073 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CXCR4P61073 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.14■□□□□ 0.01
CXCR4P61073 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.14■□□□□ 0.01
CXCR4P61073 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 REXO1L8P-201ENST00000604378 1897 ntBASIC15.14■□□□□ 0.01
CXCR4P61073 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.14■□□□□ 0.01
CXCR4P61073 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CXCR4P61073 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CXCR4P61073 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.14■□□□□ 0.01
CXCR4P61073 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.14■□□□□ 0.01
CXCR4P61073 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.14■□□□□ 0.01
CXCR4P61073 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
CXCR4P61073 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 AC091607.1-201ENST00000490318 1060 ntBASIC15.14■□□□□ 0.01
CXCR4P61073 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.14■□□□□ 0.01
CXCR4P61073 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.14■□□□□ 0.01
CXCR4P61073 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.14■□□□□ 0.01
CXCR4P61073 AL136038.3-201ENST00000561909 1096 ntBASIC15.14■□□□□ 0.01
CXCR4P61073 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.14■□□□□ 0.01
CXCR4P61073 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.14■□□□□ 0.01
CXCR4P61073 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.14■□□□□ 0.01
CXCR4P61073 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.14■□□□□ 0.01
CXCR4P61073 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CXCR4P61073 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.14■□□□□ 0.01
CXCR4P61073 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.14■□□□□ 0.01
CXCR4P61073 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.14■□□□□ 0.01
CXCR4P61073 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.14■□□□□ 0.01
CXCR4P61073 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 TMBIM7P-203ENST00000641617 1718 ntBASIC15.14■□□□□ 0.01
CXCR4P61073 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
CXCR4P61073 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CXCR4P61073 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms