Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN8P56748 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN8P56748 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN8P56748 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CLDN8P56748 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CLDN8P56748 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN8P56748 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN8P56748 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN8P56748 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN8P56748 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CLDN8P56748 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN8P56748 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN8P56748 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN8P56748 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN8P56748 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN8P56748 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN8P56748 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN8P56748 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN8P56748 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN8P56748 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN8P56748 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN8P56748 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN8P56748 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN8P56748 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN8P56748 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN8P56748 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN8P56748 AC073648.2-201ENST00000510116 352 ntBASIC15.79■□□□□ 0.12
CLDN8P56748 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.79■□□□□ 0.12
CLDN8P56748 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.79■□□□□ 0.12
CLDN8P56748 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CLDN8P56748 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
CLDN8P56748 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN8P56748 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN8P56748 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CLDN8P56748 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN8P56748 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN8P56748 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN8P56748 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN8P56748 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN8P56748 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN8P56748 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CLDN8P56748 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN8P56748 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN8P56748 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN8P56748 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CLDN8P56748 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN8P56748 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN8P56748 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN8P56748 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN8P56748 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN8P56748 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLDN8P56748 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN8P56748 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN8P56748 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN8P56748 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
CLDN8P56748 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN8P56748 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN8P56748 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN8P56748 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN8P56748 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN8P56748 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN8P56748 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN8P56748 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN8P56748 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN8P56748 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN8P56748 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN8P56748 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.78■□□□□ 0.12
CLDN8P56748 RNPS1P1-201ENST00000507437 918 ntBASIC15.78■□□□□ 0.12
CLDN8P56748 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN8P56748 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN8P56748 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.78■□□□□ 0.12
CLDN8P56748 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.78■□□□□ 0.12
CLDN8P56748 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLDN8P56748 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.78■□□□□ 0.12
CLDN8P56748 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN8P56748 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN8P56748 MIR1199-201ENST00000621445 119 ntBASIC15.78■□□□□ 0.12
CLDN8P56748 AC008735.5-201ENST00000623544 497 ntBASIC15.78■□□□□ 0.12
CLDN8P56748 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN8P56748 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CLDN8P56748 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
CLDN8P56748 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN8P56748 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN8P56748 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN8P56748 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN8P56748 AC010491.1-201ENST00000563101 2797 ntBASIC15.78■□□□□ 0.12
CLDN8P56748 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN8P56748 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN8P56748 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN8P56748 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN8P56748 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN8P56748 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN8P56748 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN8P56748 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDN8P56748 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN8P56748 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN8P56748 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.77■□□□□ 0.12
CLDN8P56748 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CLDN8P56748 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN8P56748 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms