Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.51■□□□□ 0.71
CACNB3P54284 WASH4P-201ENST00000564273 1246 ntBASIC19.51■□□□□ 0.71
CACNB3P54284 AC140912.1-201ENST00000577171 1054 ntBASIC19.51■□□□□ 0.71
CACNB3P54284 CHCHD2P3-201ENST00000603038 451 ntBASIC19.51■□□□□ 0.71
CACNB3P54284 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CACNB3P54284 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 AC138969.3-201ENST00000546612 1459 ntBASIC19.51■□□□□ 0.71
CACNB3P54284 AC138932.2-201ENST00000548268 1459 ntBASIC19.51■□□□□ 0.71
CACNB3P54284 AC126755.4-201ENST00000549796 1459 ntBASIC19.51■□□□□ 0.71
CACNB3P54284 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
CACNB3P54284 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.51■□□□□ 0.71
CACNB3P54284 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CACNB3P54284 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.51■□□□□ 0.71
CACNB3P54284 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.51■□□□□ 0.71
CACNB3P54284 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.51■□□□□ 0.71
CACNB3P54284 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CACNB3P54284 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.51■□□□□ 0.71
CACNB3P54284 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 CU639417.3-201ENST00000624240 1404 ntBASIC19.51■□□□□ 0.71
CACNB3P54284 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNB3P54284 AL603756.1-201ENST00000606511 2163 ntBASIC19.5■□□□□ 0.71
CACNB3P54284 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNB3P54284 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.5■□□□□ 0.71
CACNB3P54284 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNB3P54284 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.5■□□□□ 0.71
CACNB3P54284 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.5■□□□□ 0.71
CACNB3P54284 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CACNB3P54284 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNB3P54284 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.5■□□□□ 0.71
CACNB3P54284 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNB3P54284 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CACNB3P54284 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNB3P54284 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.5■□□□□ 0.71
CACNB3P54284 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.5■□□□□ 0.71
CACNB3P54284 U91328.1-201ENST00000437528 223 ntBASIC19.5■□□□□ 0.71
CACNB3P54284 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.5■□□□□ 0.71
CACNB3P54284 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.5■□□□□ 0.71
CACNB3P54284 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.5■□□□□ 0.71
CACNB3P54284 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CACNB3P54284 AC061975.2-201ENST00000581722 295 ntBASIC19.5■□□□□ 0.71
CACNB3P54284 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CACNB3P54284 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.5■□□□□ 0.71
CACNB3P54284 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CACNB3P54284 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNB3P54284 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CACNB3P54284 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNB3P54284 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNB3P54284 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CACNB3P54284 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CACNB3P54284 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.5■□□□□ 0.71
CACNB3P54284 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNB3P54284 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNB3P54284 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CACNB3P54284 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.5■□□□□ 0.71
CACNB3P54284 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNB3P54284 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.49■□□□□ 0.71
CACNB3P54284 GPAA1P2-202ENST00000606848 1787 ntBASIC19.49■□□□□ 0.71
CACNB3P54284 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNB3P54284 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNB3P54284 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.49■□□□□ 0.71
CACNB3P54284 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.49■□□□□ 0.71
CACNB3P54284 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNB3P54284 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CACNB3P54284 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CACNB3P54284 GGT4P-201ENST00000623672 1708 ntBASIC19.49■□□□□ 0.71
CACNB3P54284 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNB3P54284 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNB3P54284 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CACNB3P54284 AL353779.1-201ENST00000434793 351 ntBASIC19.49■□□□□ 0.71
CACNB3P54284 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CACNB3P54284 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.49■□□□□ 0.71
CACNB3P54284 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CACNB3P54284 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CACNB3P54284 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.49■□□□□ 0.71
CACNB3P54284 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.49■□□□□ 0.71
CACNB3P54284 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.49■□□□□ 0.71
CACNB3P54284 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.49■□□□□ 0.71
CACNB3P54284 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CACNB3P54284 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CACNB3P54284 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNB3P54284 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CACNB3P54284 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.49■□□□□ 0.71
CACNB3P54284 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNB3P54284 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms