Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLK1P49759 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLK1P49759 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.69■□□□□ 0.1
CLK1P49759 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLK1P49759 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CLK1P49759 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLK1P49759 AC024909.3-201ENST00000611513 2257 ntBASIC15.69■□□□□ 0.1
CLK1P49759 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLK1P49759 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.69■□□□□ 0.1
CLK1P49759 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLK1P49759 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLK1P49759 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CLK1P49759 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLK1P49759 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.68■□□□□ 0.1
CLK1P49759 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.68■□□□□ 0.1
CLK1P49759 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLK1P49759 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.68■□□□□ 0.1
CLK1P49759 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
CLK1P49759 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLK1P49759 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CLK1P49759 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLK1P49759 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLK1P49759 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLK1P49759 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CLK1P49759 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLK1P49759 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLK1P49759 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.68■□□□□ 0.1
CLK1P49759 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CLK1P49759 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.68■□□□□ 0.1
CLK1P49759 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLK1P49759 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLK1P49759 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLK1P49759 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.68■□□□□ 0.1
CLK1P49759 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.68■□□□□ 0.1
CLK1P49759 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.68■□□□□ 0.1
CLK1P49759 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.68■□□□□ 0.1
CLK1P49759 AP001269.4-201ENST00000609611 512 ntBASIC15.68■□□□□ 0.1
CLK1P49759 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CLK1P49759 AL355877.3-201ENST00000622820 899 ntBASIC15.68■□□□□ 0.1
CLK1P49759 AL139288.1-201ENST00000623748 933 ntBASIC15.68■□□□□ 0.1
CLK1P49759 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLK1P49759 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLK1P49759 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLK1P49759 DBET-201ENST00000630918 3363 ntBASIC15.68■□□□□ 0.1
CLK1P49759 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLK1P49759 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLK1P49759 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLK1P49759 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.68■□□□□ 0.1
CLK1P49759 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLK1P49759 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.68■□□□□ 0.1
CLK1P49759 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.68■□□□□ 0.1
CLK1P49759 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLK1P49759 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLK1P49759 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLK1P49759 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CLK1P49759 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLK1P49759 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLK1P49759 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.67■□□□□ 0.1
CLK1P49759 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLK1P49759 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLK1P49759 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLK1P49759 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLK1P49759 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLK1P49759 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.67■□□□□ 0.1
CLK1P49759 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLK1P49759 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.67■□□□□ 0.1
CLK1P49759 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLK1P49759 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLK1P49759 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLK1P49759 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CLK1P49759 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.67■□□□□ 0.1
CLK1P49759 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.67■□□□□ 0.1
CLK1P49759 SAPCD2P3-201ENST00000455031 850 ntBASIC15.67■□□□□ 0.1
CLK1P49759 SCARNA2-201ENST00000458748 420 ntBASIC15.67■□□□□ 0.1
CLK1P49759 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLK1P49759 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLK1P49759 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.67■□□□□ 0.1
CLK1P49759 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.67■□□□□ 0.1
CLK1P49759 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLK1P49759 AL732292.2-201ENST00000609649 430 ntBASIC15.67■□□□□ 0.1
CLK1P49759 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.67■□□□□ 0.1
CLK1P49759 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.67■□□□□ 0.1
CLK1P49759 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLK1P49759 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLK1P49759 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLK1P49759 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLK1P49759 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CLK1P49759 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLK1P49759 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLK1P49759 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CLK1P49759 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.66■□□□□ 0.1
CLK1P49759 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CLK1P49759 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms