Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
APOBEC1P41238 POLD2P1-201ENST00000511220 997 ntBASIC15□□□□□ -0.01
APOBEC1P41238 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15□□□□□ -0.01
APOBEC1P41238 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15□□□□□ -0.01
APOBEC1P41238 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15□□□□□ -0.01
APOBEC1P41238 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
APOBEC1P41238 AP002472.1-201ENST00000577490 586 ntBASIC15□□□□□ -0.01
APOBEC1P41238 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15□□□□□ -0.01
APOBEC1P41238 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15□□□□□ -0.01
APOBEC1P41238 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15□□□□□ -0.01
APOBEC1P41238 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15□□□□□ -0.01
APOBEC1P41238 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
APOBEC1P41238 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOBEC1P41238 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15□□□□□ -0.01
APOBEC1P41238 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOBEC1P41238 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
APOBEC1P41238 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15□□□□□ -0.01
APOBEC1P41238 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15□□□□□ -0.01
APOBEC1P41238 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOBEC1P41238 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOBEC1P41238 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOBEC1P41238 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOBEC1P41238 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOBEC1P41238 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOBEC1P41238 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOBEC1P41238 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOBEC1P41238 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOBEC1P41238 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOBEC1P41238 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
APOBEC1P41238 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOBEC1P41238 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
APOBEC1P41238 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
APOBEC1P41238 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
APOBEC1P41238 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.99□□□□□ -0.01
APOBEC1P41238 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.99□□□□□ -0.01
APOBEC1P41238 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOBEC1P41238 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.99□□□□□ -0.01
APOBEC1P41238 AC023274.1-201ENST00000418278 595 ntBASIC14.99□□□□□ -0.01
APOBEC1P41238 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.99□□□□□ -0.01
APOBEC1P41238 KRT18P34-201ENST00000488218 1270 ntBASIC14.99□□□□□ -0.01
APOBEC1P41238 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.99□□□□□ -0.01
APOBEC1P41238 PGAM5P1-201ENST00000518923 814 ntBASIC14.99□□□□□ -0.01
APOBEC1P41238 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOBEC1P41238 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
APOBEC1P41238 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.99□□□□□ -0.01
APOBEC1P41238 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.99□□□□□ -0.01
APOBEC1P41238 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOBEC1P41238 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
APOBEC1P41238 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.99□□□□□ -0.01
APOBEC1P41238 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.99□□□□□ -0.01
APOBEC1P41238 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOBEC1P41238 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOBEC1P41238 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.99□□□□□ -0.01
APOBEC1P41238 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
APOBEC1P41238 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
APOBEC1P41238 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOBEC1P41238 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOBEC1P41238 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
APOBEC1P41238 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOBEC1P41238 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOBEC1P41238 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOBEC1P41238 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
APOBEC1P41238 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOBEC1P41238 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOBEC1P41238 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
APOBEC1P41238 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.98□□□□□ -0.01
APOBEC1P41238 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
APOBEC1P41238 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.98□□□□□ -0.01
APOBEC1P41238 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
APOBEC1P41238 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.98□□□□□ -0.01
APOBEC1P41238 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
APOBEC1P41238 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
APOBEC1P41238 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
APOBEC1P41238 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.98□□□□□ -0.01
APOBEC1P41238 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.98□□□□□ -0.01
APOBEC1P41238 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.98□□□□□ -0.01
APOBEC1P41238 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.98□□□□□ -0.01
APOBEC1P41238 MCCD1P2-201ENST00000423228 335 ntBASIC14.98□□□□□ -0.01
APOBEC1P41238 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.98□□□□□ -0.01
APOBEC1P41238 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.98□□□□□ -0.01
APOBEC1P41238 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.98□□□□□ -0.01
APOBEC1P41238 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.98□□□□□ -0.01
APOBEC1P41238 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms