Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCLP35914 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.48■□□□□ 0.23
HMGCLP35914 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCLP35914 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
HMGCLP35914 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
HMGCLP35914 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCLP35914 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
HMGCLP35914 AC092865.5-201ENST00000545435 363 ntBASIC16.48■□□□□ 0.23
HMGCLP35914 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
HMGCLP35914 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
HMGCLP35914 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCLP35914 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.48■□□□□ 0.23
HMGCLP35914 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HMGCLP35914 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.48■□□□□ 0.23
HMGCLP35914 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.48■□□□□ 0.23
HMGCLP35914 AC026120.1-201ENST00000611536 926 ntBASIC16.48■□□□□ 0.23
HMGCLP35914 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
HMGCLP35914 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.48■□□□□ 0.23
HMGCLP35914 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.48■□□□□ 0.23
HMGCLP35914 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCLP35914 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HMGCLP35914 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HMGCLP35914 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCLP35914 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HMGCLP35914 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.48■□□□□ 0.23
HMGCLP35914 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCLP35914 AC124067.4-201ENST00000519691 2379 ntBASIC16.48■□□□□ 0.23
HMGCLP35914 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
HMGCLP35914 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.47■□□□□ 0.23
HMGCLP35914 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HMGCLP35914 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HMGCLP35914 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.47■□□□□ 0.23
HMGCLP35914 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HMGCLP35914 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.47■□□□□ 0.23
HMGCLP35914 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.47■□□□□ 0.23
HMGCLP35914 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGCLP35914 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.47■□□□□ 0.23
HMGCLP35914 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGCLP35914 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGCLP35914 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.47■□□□□ 0.23
HMGCLP35914 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGCLP35914 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGCLP35914 AC073439.1-201ENST00000624121 1774 ntBASIC16.47■□□□□ 0.23
HMGCLP35914 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
HMGCLP35914 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGCLP35914 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGCLP35914 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.47■□□□□ 0.23
HMGCLP35914 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.47■□□□□ 0.23
HMGCLP35914 CEND1P1-201ENST00000451006 455 ntBASIC16.47■□□□□ 0.23
HMGCLP35914 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.47■□□□□ 0.23
HMGCLP35914 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.47■□□□□ 0.23
HMGCLP35914 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.47■□□□□ 0.23
HMGCLP35914 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.47■□□□□ 0.23
HMGCLP35914 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.47■□□□□ 0.23
HMGCLP35914 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.47■□□□□ 0.23
HMGCLP35914 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HMGCLP35914 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
HMGCLP35914 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGCLP35914 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.47■□□□□ 0.23
HMGCLP35914 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HMGCLP35914 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.47■□□□□ 0.23
HMGCLP35914 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGCLP35914 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGCLP35914 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGCLP35914 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
HMGCLP35914 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.47■□□□□ 0.23
HMGCLP35914 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGCLP35914 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HMGCLP35914 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMGCLP35914 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HMGCLP35914 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.46■□□□□ 0.23
HMGCLP35914 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HMGCLP35914 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HMGCLP35914 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMGCLP35914 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMGCLP35914 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
HMGCLP35914 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMGCLP35914 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMGCLP35914 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HMGCLP35914 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.46■□□□□ 0.23
HMGCLP35914 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.46■□□□□ 0.23
HMGCLP35914 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.46■□□□□ 0.23
HMGCLP35914 AC093724.1-201ENST00000448659 1027 ntBASIC16.46■□□□□ 0.23
HMGCLP35914 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.46■□□□□ 0.23
HMGCLP35914 AC243562.1-201ENST00000560672 389 ntBASIC16.46■□□□□ 0.23
HMGCLP35914 MIR4469-201ENST00000583919 79 ntBASIC16.46■□□□□ 0.23
HMGCLP35914 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.46■□□□□ 0.23
HMGCLP35914 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HMGCLP35914 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.46■□□□□ 0.23
HMGCLP35914 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.46■□□□□ 0.23
HMGCLP35914 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.46■□□□□ 0.23
HMGCLP35914 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HMGCLP35914 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.46■□□□□ 0.23
HMGCLP35914 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.46■□□□□ 0.23
HMGCLP35914 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMGCLP35914 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HMGCLP35914 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMGCLP35914 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMGCLP35914 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HMGCLP35914 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms