Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
COPB2P35606 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COPB2P35606 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COPB2P35606 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.89■□□□□ 0.61
COPB2P35606 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
COPB2P35606 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COPB2P35606 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.89■□□□□ 0.61
COPB2P35606 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.89■□□□□ 0.61
COPB2P35606 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.89■□□□□ 0.61
COPB2P35606 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COPB2P35606 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COPB2P35606 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.88■□□□□ 0.61
COPB2P35606 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COPB2P35606 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.88■□□□□ 0.61
COPB2P35606 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
COPB2P35606 OR6D1P-202ENST00000641007 5290 ntBASIC18.88■□□□□ 0.61
COPB2P35606 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
COPB2P35606 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.88■□□□□ 0.61
COPB2P35606 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COPB2P35606 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COPB2P35606 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
COPB2P35606 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
COPB2P35606 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COPB2P35606 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COPB2P35606 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COPB2P35606 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COPB2P35606 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.88■□□□□ 0.61
COPB2P35606 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COPB2P35606 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.88■□□□□ 0.61
COPB2P35606 CR383656.12-201ENST00000549567 513 ntBASIC18.88■□□□□ 0.61
COPB2P35606 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
COPB2P35606 AC105021.1-202ENST00000570572 669 ntBASIC18.88■□□□□ 0.61
COPB2P35606 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.88■□□□□ 0.61
COPB2P35606 SPDYE22P-201ENST00000582158 798 ntBASIC18.88■□□□□ 0.61
COPB2P35606 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.88■□□□□ 0.61
COPB2P35606 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.88■□□□□ 0.61
COPB2P35606 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COPB2P35606 AC020765.3-201ENST00000613051 740 ntBASIC18.88■□□□□ 0.61
COPB2P35606 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.88■□□□□ 0.61
COPB2P35606 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
COPB2P35606 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.88■□□□□ 0.61
COPB2P35606 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
COPB2P35606 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COPB2P35606 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.88■□□□□ 0.61
COPB2P35606 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COPB2P35606 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COPB2P35606 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COPB2P35606 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COPB2P35606 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.88■□□□□ 0.61
COPB2P35606 SNX33P1-201ENST00000592116 1762 ntBASIC18.88■□□□□ 0.61
COPB2P35606 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.88■□□□□ 0.61
COPB2P35606 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COPB2P35606 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
COPB2P35606 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COPB2P35606 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.87■□□□□ 0.61
COPB2P35606 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
COPB2P35606 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPB2P35606 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.87■□□□□ 0.61
COPB2P35606 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPB2P35606 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COPB2P35606 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPB2P35606 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COPB2P35606 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.87■□□□□ 0.61
COPB2P35606 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.87■□□□□ 0.61
COPB2P35606 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPB2P35606 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.87■□□□□ 0.61
COPB2P35606 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COPB2P35606 MTND6P24-201ENST00000440466 518 ntBASIC18.87■□□□□ 0.61
COPB2P35606 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.87■□□□□ 0.61
COPB2P35606 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COPB2P35606 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.87■□□□□ 0.61
COPB2P35606 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.87■□□□□ 0.61
COPB2P35606 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.87■□□□□ 0.61
COPB2P35606 AC024267.1-201ENST00000582320 895 ntBASIC18.87■□□□□ 0.61
COPB2P35606 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPB2P35606 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.87■□□□□ 0.61
COPB2P35606 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.87■□□□□ 0.61
COPB2P35606 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COPB2P35606 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPB2P35606 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPB2P35606 AC022211.2-201ENST00000585075 2527 ntBASIC18.87■□□□□ 0.61
COPB2P35606 AL671710.1-201ENST00000610245 2349 ntBASIC18.86■□□□□ 0.61
COPB2P35606 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
COPB2P35606 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COPB2P35606 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COPB2P35606 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COPB2P35606 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COPB2P35606 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COPB2P35606 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.86■□□□□ 0.61
COPB2P35606 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COPB2P35606 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.86■□□□□ 0.61
COPB2P35606 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COPB2P35606 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COPB2P35606 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.86■□□□□ 0.61
COPB2P35606 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.86■□□□□ 0.61
COPB2P35606 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
COPB2P35606 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
COPB2P35606 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COPB2P35606 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.86■□□□□ 0.61
COPB2P35606 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms