Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.7■□□□□ 0.26
LSP1P33241 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.7■□□□□ 0.26
LSP1P33241 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.7■□□□□ 0.26
LSP1P33241 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.7■□□□□ 0.26
LSP1P33241 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.7■□□□□ 0.26
LSP1P33241 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LSP1P33241 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
LSP1P33241 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.7■□□□□ 0.26
LSP1P33241 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.7■□□□□ 0.26
LSP1P33241 AL353692.3-201ENST00000407031 1396 ntBASIC16.7■□□□□ 0.26
LSP1P33241 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.7■□□□□ 0.26
LSP1P33241 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LSP1P33241 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.7■□□□□ 0.26
LSP1P33241 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.7■□□□□ 0.26
LSP1P33241 TSPY7P-201ENST00000431358 1114 ntBASIC16.7■□□□□ 0.26
LSP1P33241 AC103564.2-201ENST00000432853 1299 ntBASIC16.7■□□□□ 0.26
LSP1P33241 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 ECEL1P2-202ENST00000465689 757 ntBASIC16.7■□□□□ 0.26
LSP1P33241 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.7■□□□□ 0.26
LSP1P33241 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
LSP1P33241 STK19B-204ENST00000512515 211 ntBASIC16.7■□□□□ 0.26
LSP1P33241 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.7■□□□□ 0.26
LSP1P33241 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.7■□□□□ 0.26
LSP1P33241 AL136038.4-201ENST00000603606 1261 ntBASIC16.7■□□□□ 0.26
LSP1P33241 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.7■□□□□ 0.26
LSP1P33241 AC079602.3-201ENST00000623931 403 ntBASIC16.7■□□□□ 0.26
LSP1P33241 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LSP1P33241 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
LSP1P33241 CICP23-201ENST00000605013 2741 ntBASIC16.7■□□□□ 0.26
LSP1P33241 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.7■□□□□ 0.26
LSP1P33241 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.7■□□□□ 0.26
LSP1P33241 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LSP1P33241 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 KRT8P49-201ENST00000604166 1432 ntBASIC16.7■□□□□ 0.26
LSP1P33241 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSP1P33241 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.7■□□□□ 0.26
LSP1P33241 LINC00528-201ENST00000600723 2160 ntBASIC16.7■□□□□ 0.26
LSP1P33241 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSP1P33241 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LSP1P33241 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSP1P33241 LINC01101-201ENST00000622953 1884 ntBASIC16.69■□□□□ 0.26
LSP1P33241 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LSP1P33241 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LSP1P33241 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSP1P33241 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.69■□□□□ 0.26
LSP1P33241 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LSP1P33241 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LSP1P33241 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LSP1P33241 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LSP1P33241 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSP1P33241 IGHGP-201ENST00000390555 1178 ntBASIC16.69■□□□□ 0.26
LSP1P33241 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
LSP1P33241 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.69■□□□□ 0.26
LSP1P33241 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LSP1P33241 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LSP1P33241 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.69■□□□□ 0.26
LSP1P33241 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.69■□□□□ 0.26
LSP1P33241 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSP1P33241 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.69■□□□□ 0.26
LSP1P33241 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSP1P33241 AL031731.1-201ENST00000642131 2094 ntBASIC16.69■□□□□ 0.26
LSP1P33241 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.69■□□□□ 0.26
LSP1P33241 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSP1P33241 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSP1P33241 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSP1P33241 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.69■□□□□ 0.26
LSP1P33241 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.69■□□□□ 0.26
LSP1P33241 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSP1P33241 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.69■□□□□ 0.26
LSP1P33241 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSP1P33241 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSP1P33241 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LSP1P33241 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LSP1P33241 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSP1P33241 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSP1P33241 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSP1P33241 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSP1P33241 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.68■□□□□ 0.26
LSP1P33241 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms