Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.02□□□□□ -0.17
COL8A2P25067 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
COL8A2P25067 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COL8A2P25067 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
COL8A2P25067 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.01□□□□□ -0.17
COL8A2P25067 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
COL8A2P25067 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
COL8A2P25067 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A2P25067 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.01□□□□□ -0.17
COL8A2P25067 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A2P25067 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.01□□□□□ -0.17
COL8A2P25067 LINC00895-201ENST00000629028 1637 ntBASIC14.01□□□□□ -0.17
COL8A2P25067 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A2P25067 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A2P25067 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
COL8A2P25067 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.01□□□□□ -0.17
COL8A2P25067 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A2P25067 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
COL8A2P25067 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A2P25067 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.01□□□□□ -0.17
COL8A2P25067 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
COL8A2P25067 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.01□□□□□ -0.17
COL8A2P25067 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A2P25067 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A2P25067 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
COL8A2P25067 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.01□□□□□ -0.17
COL8A2P25067 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.01□□□□□ -0.17
COL8A2P25067 GPS2P2-201ENST00000430745 888 ntBASIC14.01□□□□□ -0.17
COL8A2P25067 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.01□□□□□ -0.17
COL8A2P25067 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.01□□□□□ -0.17
COL8A2P25067 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.01□□□□□ -0.17
COL8A2P25067 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.01□□□□□ -0.17
COL8A2P25067 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.01□□□□□ -0.17
COL8A2P25067 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
COL8A2P25067 AC093512.1-201ENST00000617969 520 ntBASIC14.01□□□□□ -0.17
COL8A2P25067 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A2P25067 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A2P25067 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A2P25067 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A2P25067 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A2P25067 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
COL8A2P25067 AL391256.1-201ENST00000443260 1855 ntBASIC14.01□□□□□ -0.17
COL8A2P25067 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.01□□□□□ -0.17
COL8A2P25067 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
COL8A2P25067 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A2P25067 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
COL8A2P25067 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A2P25067 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
COL8A2P25067 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A2P25067 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.01□□□□□ -0.17
COL8A2P25067 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A2P25067 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A2P25067 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A2P25067 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A2P25067 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A2P25067 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL8A2P25067 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
COL8A2P25067 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14□□□□□ -0.17
COL8A2P25067 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
COL8A2P25067 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A2P25067 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
COL8A2P25067 AL645728.1-201ENST00000366221 2101 ntBASIC14□□□□□ -0.17
COL8A2P25067 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
COL8A2P25067 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A2P25067 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14□□□□□ -0.17
COL8A2P25067 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14□□□□□ -0.17
COL8A2P25067 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A2P25067 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
COL8A2P25067 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL8A2P25067 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
COL8A2P25067 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A2P25067 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL8A2P25067 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A2P25067 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A2P25067 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14□□□□□ -0.17
COL8A2P25067 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14□□□□□ -0.17
COL8A2P25067 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14□□□□□ -0.17
COL8A2P25067 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14□□□□□ -0.17
COL8A2P25067 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14□□□□□ -0.17
COL8A2P25067 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
COL8A2P25067 KRT18P34-201ENST00000488218 1270 ntBASIC14□□□□□ -0.17
COL8A2P25067 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14□□□□□ -0.17
COL8A2P25067 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14□□□□□ -0.17
COL8A2P25067 SLC25A39P2-201ENST00000537614 270 ntBASIC14□□□□□ -0.17
COL8A2P25067 SIGLEC29P-201ENST00000599873 1114 ntBASIC14□□□□□ -0.17
COL8A2P25067 Z92544.3-201ENST00000624747 417 ntBASIC14□□□□□ -0.17
COL8A2P25067 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
COL8A2P25067 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14□□□□□ -0.17
COL8A2P25067 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL8A2P25067 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A2P25067 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14□□□□□ -0.17
COL8A2P25067 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A2P25067 AGGF1P2-201ENST00000426656 2106 ntBASIC14□□□□□ -0.17
COL8A2P25067 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A2P25067 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14□□□□□ -0.17
COL8A2P25067 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
COL8A2P25067 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14□□□□□ -0.17
COL8A2P25067 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL8A2P25067 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A2P25067 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms