Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 AL513190.1-201ENST00000621254 727 ntBASIC14.96□□□□□ -0.01
PPP3CBP16298 AC005052.1-201ENST00000625181 2492 ntBASIC14.96□□□□□ -0.01
PPP3CBP16298 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PPP3CBP16298 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
PPP3CBP16298 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PPP3CBP16298 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PPP3CBP16298 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
PPP3CBP16298 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
PPP3CBP16298 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.96□□□□□ -0.02
PPP3CBP16298 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
PPP3CBP16298 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.96□□□□□ -0.02
PPP3CBP16298 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.96□□□□□ -0.02
PPP3CBP16298 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.95□□□□□ -0.02
PPP3CBP16298 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PPP3CBP16298 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.95□□□□□ -0.02
PPP3CBP16298 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.95□□□□□ -0.02
PPP3CBP16298 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PPP3CBP16298 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.95□□□□□ -0.02
PPP3CBP16298 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.95□□□□□ -0.02
PPP3CBP16298 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 RPS8P6-201ENST00000426177 609 ntBASIC14.95□□□□□ -0.02
PPP3CBP16298 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.95□□□□□ -0.02
PPP3CBP16298 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.95□□□□□ -0.02
PPP3CBP16298 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.95□□□□□ -0.02
PPP3CBP16298 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.95□□□□□ -0.02
PPP3CBP16298 SNHG9-202ENST00000564014 471 ntBASIC14.95□□□□□ -0.02
PPP3CBP16298 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.95□□□□□ -0.02
PPP3CBP16298 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.95□□□□□ -0.02
PPP3CBP16298 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 AC022188.1-201ENST00000620960 1664 ntBASIC14.95□□□□□ -0.02
PPP3CBP16298 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.95□□□□□ -0.02
PPP3CBP16298 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.95□□□□□ -0.02
PPP3CBP16298 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
PPP3CBP16298 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.95□□□□□ -0.02
PPP3CBP16298 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.95□□□□□ -0.02
PPP3CBP16298 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
PPP3CBP16298 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.95□□□□□ -0.02
PPP3CBP16298 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PPP3CBP16298 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PPP3CBP16298 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PPP3CBP16298 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PPP3CBP16298 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.94□□□□□ -0.02
PPP3CBP16298 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PPP3CBP16298 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.94□□□□□ -0.02
PPP3CBP16298 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
PPP3CBP16298 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PPP3CBP16298 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PPP3CBP16298 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PPP3CBP16298 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PPP3CBP16298 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PPP3CBP16298 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.94□□□□□ -0.02
PPP3CBP16298 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
PPP3CBP16298 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PPP3CBP16298 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.94□□□□□ -0.02
PPP3CBP16298 DNAJB3-202ENST00000449667 1266 ntBASIC14.94□□□□□ -0.02
PPP3CBP16298 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.94□□□□□ -0.02
PPP3CBP16298 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.94□□□□□ -0.02
PPP3CBP16298 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.94□□□□□ -0.02
PPP3CBP16298 MIR4469-201ENST00000583919 79 ntBASIC14.94□□□□□ -0.02
PPP3CBP16298 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PPP3CBP16298 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.94□□□□□ -0.02
PPP3CBP16298 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.94□□□□□ -0.02
PPP3CBP16298 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PPP3CBP16298 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PPP3CBP16298 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PPP3CBP16298 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PPP3CBP16298 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PPP3CBP16298 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PPP3CBP16298 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PPP3CBP16298 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PPP3CBP16298 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.94□□□□□ -0.02
PPP3CBP16298 ELL2P1-201ENST00000413990 1906 ntBASIC14.94□□□□□ -0.02
PPP3CBP16298 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.94□□□□□ -0.02
PPP3CBP16298 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PPP3CBP16298 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
PPP3CBP16298 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PPP3CBP16298 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms