Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 AC068587.6-202ENST00000641839 5619 ntBASIC12.98□□□□□ -0.33
CD28P10747 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC12.98□□□□□ -0.33
CD28P10747 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CD28P10747 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD28P10747 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.98□□□□□ -0.33
CD28P10747 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD28P10747 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD28P10747 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD28P10747 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CD28P10747 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC12.97□□□□□ -0.33
CD28P10747 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
CD28P10747 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD28P10747 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD28P10747 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CD28P10747 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CD28P10747 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CD28P10747 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD28P10747 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD28P10747 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CD28P10747 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CD28P10747 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD28P10747 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CD28P10747 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CD28P10747 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC12.97□□□□□ -0.33
CD28P10747 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CD28P10747 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD28P10747 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.97□□□□□ -0.33
CD28P10747 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
CD28P10747 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.97□□□□□ -0.33
CD28P10747 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CD28P10747 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CD28P10747 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.97□□□□□ -0.33
CD28P10747 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.97□□□□□ -0.33
CD28P10747 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.97□□□□□ -0.33
CD28P10747 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.97□□□□□ -0.33
CD28P10747 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CD28P10747 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.97□□□□□ -0.33
CD28P10747 AC140878.1-201ENST00000565277 250 ntBASIC12.97□□□□□ -0.33
CD28P10747 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.97□□□□□ -0.33
CD28P10747 MIR4492-201ENST00000581627 80 ntBASIC12.97□□□□□ -0.33
CD28P10747 AC021097.1-201ENST00000607902 574 ntBASIC12.97□□□□□ -0.33
CD28P10747 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.97□□□□□ -0.33
CD28P10747 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD28P10747 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD28P10747 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD28P10747 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD28P10747 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CD28P10747 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CD28P10747 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CD28P10747 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD28P10747 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CD28P10747 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD28P10747 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
CD28P10747 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CD28P10747 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CD28P10747 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD28P10747 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD28P10747 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC12.96□□□□□ -0.33
CD28P10747 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.96□□□□□ -0.33
CD28P10747 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD28P10747 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CD28P10747 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC12.96□□□□□ -0.33
CD28P10747 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CD28P10747 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.96□□□□□ -0.33
CD28P10747 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC12.96□□□□□ -0.33
CD28P10747 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CD28P10747 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD28P10747 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.96□□□□□ -0.33
CD28P10747 F11R-206ENST00000621309 4770 ntTSL 5 BASIC12.96□□□□□ -0.33
CD28P10747 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD28P10747 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD28P10747 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD28P10747 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CD28P10747 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD28P10747 MIR346-201ENST00000362234 95 ntBASIC12.96□□□□□ -0.33
CD28P10747 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.96□□□□□ -0.33
CD28P10747 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.96□□□□□ -0.33
CD28P10747 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD28P10747 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.96□□□□□ -0.33
CD28P10747 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CD28P10747 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.96□□□□□ -0.33
CD28P10747 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.96□□□□□ -0.33
CD28P10747 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CD28P10747 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CD28P10747 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.96□□□□□ -0.33
CD28P10747 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CD28P10747 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD28P10747 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CD28P10747 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD28P10747 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.96□□□□□ -0.33
CD28P10747 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD28P10747 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CD28P10747 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CD28P10747 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
CD28P10747 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms