Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 AC131009.4-201ENST00000624048 1740 ntBASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
IGHV3-43DP0DP04 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
IGHV3-43DP0DP04 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.19
IGHV3-43DP0DP04 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.83□□□□□ -0.19
IGHV3-43DP0DP04 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 AL450487.1-201ENST00000426799 995 ntBASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 AC092910.1-201ENST00000482027 1129 ntBASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 GGTLC5P-201ENST00000617623 998 ntBASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 SNX33P1-201ENST00000592116 1762 ntBASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.83□□□□□ -0.2
IGHV3-43DP0DP04 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 SLC22A20-204ENST00000530038 1673 ntBASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 NORAD-201ENST00000565493 5339 ntBASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 AC107918.2-201ENST00000530817 355 ntBASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 AC005593.1-201ENST00000624894 515 ntBASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms