Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CD48P09326 AC007967.2-201ENST00000432613 625 ntBASIC17.2■□□□□ 0.34
CD48P09326 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.2■□□□□ 0.34
CD48P09326 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.2■□□□□ 0.34
CD48P09326 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.2■□□□□ 0.34
CD48P09326 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.2■□□□□ 0.34
CD48P09326 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD48P09326 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
CD48P09326 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD48P09326 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD48P09326 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
CD48P09326 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.2■□□□□ 0.34
CD48P09326 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD48P09326 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD48P09326 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.2■□□□□ 0.34
CD48P09326 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.2■□□□□ 0.34
CD48P09326 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.2■□□□□ 0.34
CD48P09326 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD48P09326 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD48P09326 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CD48P09326 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CD48P09326 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD48P09326 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CD48P09326 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CD48P09326 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CD48P09326 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CD48P09326 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.19■□□□□ 0.34
CD48P09326 AL596087.1-201ENST00000400979 1969 ntBASIC17.19■□□□□ 0.34
CD48P09326 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CD48P09326 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD48P09326 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD48P09326 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CD48P09326 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CD48P09326 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD48P09326 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD48P09326 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD48P09326 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD48P09326 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD48P09326 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
CD48P09326 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.19■□□□□ 0.34
CD48P09326 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.19■□□□□ 0.34
CD48P09326 AL031432.2-201ENST00000566714 459 ntBASIC17.19■□□□□ 0.34
CD48P09326 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
CD48P09326 AL928711.1-201ENST00000570165 459 ntBASIC17.19■□□□□ 0.34
CD48P09326 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.19■□□□□ 0.34
CD48P09326 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.19■□□□□ 0.34
CD48P09326 AL031055.1-201ENST00000606362 631 ntBASIC17.19■□□□□ 0.34
CD48P09326 AC064836.3-201ENST00000607928 673 ntBASIC17.19■□□□□ 0.34
CD48P09326 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.19■□□□□ 0.34
CD48P09326 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.19■□□□□ 0.34
CD48P09326 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.19■□□□□ 0.34
CD48P09326 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD48P09326 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD48P09326 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD48P09326 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD48P09326 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD48P09326 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CD48P09326 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD48P09326 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.19■□□□□ 0.34
CD48P09326 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CD48P09326 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CD48P09326 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.19■□□□□ 0.34
CD48P09326 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD48P09326 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD48P09326 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD48P09326 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD48P09326 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD48P09326 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.18■□□□□ 0.34
CD48P09326 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD48P09326 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD48P09326 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD48P09326 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.18■□□□□ 0.34
CD48P09326 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD48P09326 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD48P09326 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.18■□□□□ 0.34
CD48P09326 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD48P09326 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.18■□□□□ 0.34
CD48P09326 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.18■□□□□ 0.34
CD48P09326 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.18■□□□□ 0.34
CD48P09326 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.18■□□□□ 0.34
CD48P09326 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.18■□□□□ 0.34
CD48P09326 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD48P09326 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.18■□□□□ 0.34
CD48P09326 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CD48P09326 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.18■□□□□ 0.34
CD48P09326 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.18■□□□□ 0.34
CD48P09326 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.18■□□□□ 0.34
CD48P09326 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
CD48P09326 AL645728.2-201ENST00000641974 660 ntBASIC17.18■□□□□ 0.34
CD48P09326 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD48P09326 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD48P09326 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD48P09326 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD48P09326 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
CD48P09326 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.18■□□□□ 0.34
CD48P09326 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.18■□□□□ 0.34
CD48P09326 LINC01144-201ENST00000626198 1710 ntBASIC17.18■□□□□ 0.34
CD48P09326 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.18■□□□□ 0.34
CD48P09326 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.18■□□□□ 0.34
CD48P09326 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms