Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CTSDP07339 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CTSDP07339 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSDP07339 SPDYE21P-201ENST00000413323 827 ntBASIC13.83□□□□□ -0.2
CTSDP07339 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CTSDP07339 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.83□□□□□ -0.2
CTSDP07339 LINC01238-205ENST00000567549 1107 ntBASIC13.83□□□□□ -0.2
CTSDP07339 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.83□□□□□ -0.2
CTSDP07339 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSDP07339 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSDP07339 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.83□□□□□ -0.2
CTSDP07339 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.83□□□□□ -0.2
CTSDP07339 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSDP07339 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSDP07339 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CTSDP07339 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
CTSDP07339 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CTSDP07339 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSDP07339 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.83□□□□□ -0.2
CTSDP07339 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CTSDP07339 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSDP07339 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSDP07339 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSDP07339 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CTSDP07339 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CTSDP07339 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.83□□□□□ -0.2
CTSDP07339 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSDP07339 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CTSDP07339 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSDP07339 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CTSDP07339 REXO1L8P-201ENST00000604378 1897 ntBASIC13.82□□□□□ -0.2
CTSDP07339 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
CTSDP07339 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.82□□□□□ -0.2
CTSDP07339 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CTSDP07339 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.82□□□□□ -0.2
CTSDP07339 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.82□□□□□ -0.2
CTSDP07339 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.82□□□□□ -0.2
CTSDP07339 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.82□□□□□ -0.2
CTSDP07339 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.82□□□□□ -0.2
CTSDP07339 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.82□□□□□ -0.2
CTSDP07339 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.82□□□□□ -0.2
CTSDP07339 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.82□□□□□ -0.2
CTSDP07339 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.82□□□□□ -0.2
CTSDP07339 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.82□□□□□ -0.2
CTSDP07339 AL590326.2-201ENST00000625139 305 ntBASIC13.82□□□□□ -0.2
CTSDP07339 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.82□□□□□ -0.2
CTSDP07339 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CTSDP07339 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CTSDP07339 PCGF3-213ENST00000620529 1899 ntBASIC13.82□□□□□ -0.2
CTSDP07339 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.82□□□□□ -0.2
CTSDP07339 AC067930.6-201ENST00000623257 4947 ntBASIC13.82□□□□□ -0.2
CTSDP07339 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.82□□□□□ -0.2
CTSDP07339 INTS4P1-201ENST00000438455 1935 ntBASIC13.82□□□□□ -0.2
CTSDP07339 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.82□□□□□ -0.2
CTSDP07339 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.82□□□□□ -0.2
CTSDP07339 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTSDP07339 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.81□□□□□ -0.2
CTSDP07339 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
CTSDP07339 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
CTSDP07339 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CTSDP07339 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.81□□□□□ -0.2
CTSDP07339 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.81□□□□□ -0.2
CTSDP07339 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.81□□□□□ -0.2
CTSDP07339 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CTSDP07339 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms