Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.75■□□□□ 0.11
CLPTM1O96005 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.75■□□□□ 0.11
CLPTM1O96005 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPTM1O96005 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPTM1O96005 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CLPTM1O96005 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPTM1O96005 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPTM1O96005 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPTM1O96005 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLPTM1O96005 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.75■□□□□ 0.11
CLPTM1O96005 KRT8P47-201ENST00000604727 1398 ntBASIC15.75■□□□□ 0.11
CLPTM1O96005 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CLPTM1O96005 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1O96005 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.74■□□□□ 0.11
CLPTM1O96005 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CLPTM1O96005 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1O96005 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CLPTM1O96005 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1O96005 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CLPTM1O96005 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1O96005 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1O96005 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1O96005 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1O96005 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1O96005 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1O96005 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
CLPTM1O96005 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1O96005 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1O96005 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.74■□□□□ 0.11
CLPTM1O96005 HLA-F-220ENST00000434407 884 ntBASIC15.74■□□□□ 0.11
CLPTM1O96005 PVRIG2P-201ENST00000435460 978 ntBASIC15.74■□□□□ 0.11
CLPTM1O96005 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.74■□□□□ 0.11
CLPTM1O96005 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1O96005 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.74■□□□□ 0.11
CLPTM1O96005 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.74■□□□□ 0.11
CLPTM1O96005 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.74■□□□□ 0.11
CLPTM1O96005 AL358472.4-201ENST00000633140 710 ntBASIC15.74■□□□□ 0.11
CLPTM1O96005 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.74■□□□□ 0.11
CLPTM1O96005 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1O96005 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CLPTM1O96005 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.74■□□□□ 0.11
CLPTM1O96005 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CLPTM1O96005 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1O96005 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1O96005 AL161772.1-201ENST00000610494 4412 ntBASIC15.74■□□□□ 0.11
CLPTM1O96005 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.74■□□□□ 0.11
CLPTM1O96005 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1O96005 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1O96005 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1O96005 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1O96005 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1O96005 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1O96005 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1O96005 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1O96005 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.73■□□□□ 0.11
CLPTM1O96005 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CLPTM1O96005 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
CLPTM1O96005 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1O96005 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1O96005 AC005332.1-201ENST00000577698 1310 ntBASIC15.73■□□□□ 0.11
CLPTM1O96005 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CLPTM1O96005 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1O96005 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1O96005 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1O96005 AL645728.1-201ENST00000366221 2101 ntBASIC15.73■□□□□ 0.11
CLPTM1O96005 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.73■□□□□ 0.11
CLPTM1O96005 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1O96005 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1O96005 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1O96005 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1O96005 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CLPTM1O96005 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.73■□□□□ 0.11
CLPTM1O96005 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1O96005 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1O96005 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1O96005 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1O96005 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.73■□□□□ 0.11
CLPTM1O96005 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1O96005 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.73■□□□□ 0.11
CLPTM1O96005 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.73■□□□□ 0.11
CLPTM1O96005 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.73■□□□□ 0.11
CLPTM1O96005 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.73■□□□□ 0.11
CLPTM1O96005 AC008687.5-201ENST00000593746 558 ntBASIC15.73■□□□□ 0.11
CLPTM1O96005 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1O96005 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1O96005 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.73■□□□□ 0.11
CLPTM1O96005 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CLPTM1O96005 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.73■□□□□ 0.11
CLPTM1O96005 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1O96005 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1O96005 AL359258.3-201ENST00000622910 2331 ntBASIC15.73■□□□□ 0.11
CLPTM1O96005 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1O96005 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CLPTM1O96005 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CLPTM1O96005 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1O96005 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1O96005 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
CLPTM1O96005 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.72■□□□□ 0.11
CLPTM1O96005 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLPTM1O96005 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms