Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SNX4O95219 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.68■□□□□ 0.1
SNX4O95219 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.68■□□□□ 0.1
SNX4O95219 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.68■□□□□ 0.1
SNX4O95219 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SNX4O95219 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.68■□□□□ 0.1
SNX4O95219 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SNX4O95219 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SNX4O95219 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
SNX4O95219 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.68■□□□□ 0.1
SNX4O95219 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX4O95219 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX4O95219 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.67■□□□□ 0.1
SNX4O95219 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.67■□□□□ 0.1
SNX4O95219 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
SNX4O95219 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX4O95219 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.67■□□□□ 0.1
SNX4O95219 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX4O95219 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.67■□□□□ 0.1
SNX4O95219 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.67■□□□□ 0.1
SNX4O95219 AC092068.3-201ENST00000587894 2016 ntBASIC15.67■□□□□ 0.1
SNX4O95219 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX4O95219 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX4O95219 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.67■□□□□ 0.1
SNX4O95219 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.67■□□□□ 0.1
SNX4O95219 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX4O95219 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX4O95219 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX4O95219 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SNX4O95219 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNX4O95219 CRYGEP-201ENST00000412192 528 ntBASIC15.67■□□□□ 0.1
SNX4O95219 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.67■□□□□ 0.1
SNX4O95219 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SNX4O95219 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.67■□□□□ 0.1
SNX4O95219 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.67■□□□□ 0.1
SNX4O95219 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX4O95219 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SNX4O95219 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.67■□□□□ 0.1
SNX4O95219 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SNX4O95219 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX4O95219 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX4O95219 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.67■□□□□ 0.1
SNX4O95219 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
SNX4O95219 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX4O95219 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.67■□□□□ 0.1
SNX4O95219 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SNX4O95219 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX4O95219 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX4O95219 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.67■□□□□ 0.1
SNX4O95219 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNX4O95219 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SNX4O95219 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.67■□□□□ 0.1
SNX4O95219 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX4O95219 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.66■□□□□ 0.1
SNX4O95219 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX4O95219 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX4O95219 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX4O95219 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX4O95219 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SNX4O95219 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.66■□□□□ 0.1
SNX4O95219 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.66■□□□□ 0.1
SNX4O95219 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
SNX4O95219 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX4O95219 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SNX4O95219 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
SNX4O95219 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNX4O95219 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNX4O95219 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.66■□□□□ 0.1
SNX4O95219 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX4O95219 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX4O95219 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.66■□□□□ 0.1
SNX4O95219 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SNX4O95219 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX4O95219 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX4O95219 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.66■□□□□ 0.1
SNX4O95219 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX4O95219 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SNX4O95219 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SNX4O95219 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.66■□□□□ 0.1
SNX4O95219 MED15P5-201ENST00000423150 992 ntBASIC15.66■□□□□ 0.1
SNX4O95219 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.66■□□□□ 0.1
SNX4O95219 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.66■□□□□ 0.1
SNX4O95219 RNA5SP416-201ENST00000516838 111 ntBASIC15.66■□□□□ 0.1
SNX4O95219 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNX4O95219 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.66■□□□□ 0.1
SNX4O95219 MIR4751-201ENST00000578027 74 ntBASIC15.66■□□□□ 0.1
SNX4O95219 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.66■□□□□ 0.1
SNX4O95219 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.66■□□□□ 0.1
SNX4O95219 AC010654.1-201ENST00000615722 808 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms