Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDELR3O43731 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDELR3O43731 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.79■□□□□ 0.28
KDELR3O43731 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDELR3O43731 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.79■□□□□ 0.28
KDELR3O43731 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KDELR3O43731 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
KDELR3O43731 ME2P1-201ENST00000426028 1970 ntBASIC16.78■□□□□ 0.28
KDELR3O43731 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
KDELR3O43731 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KDELR3O43731 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KDELR3O43731 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDELR3O43731 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDELR3O43731 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.78■□□□□ 0.28
KDELR3O43731 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDELR3O43731 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
KDELR3O43731 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
KDELR3O43731 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDELR3O43731 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDELR3O43731 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.78■□□□□ 0.28
KDELR3O43731 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.78■□□□□ 0.28
KDELR3O43731 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.78■□□□□ 0.28
KDELR3O43731 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.78■□□□□ 0.28
KDELR3O43731 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.78■□□□□ 0.28
KDELR3O43731 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KDELR3O43731 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.78■□□□□ 0.28
KDELR3O43731 POU5F1P6-201ENST00000466990 990 ntBASIC16.78■□□□□ 0.28
KDELR3O43731 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.78■□□□□ 0.28
KDELR3O43731 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.78■□□□□ 0.28
KDELR3O43731 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.78■□□□□ 0.28
KDELR3O43731 AC027612.4-201ENST00000605371 583 ntBASIC16.78■□□□□ 0.28
KDELR3O43731 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.78■□□□□ 0.28
KDELR3O43731 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.78■□□□□ 0.28
KDELR3O43731 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.78■□□□□ 0.28
KDELR3O43731 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDELR3O43731 AC005622.1-201ENST00000636801 1703 ntBASIC16.78■□□□□ 0.28
KDELR3O43731 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.78■□□□□ 0.28
KDELR3O43731 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDELR3O43731 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDELR3O43731 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDELR3O43731 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.78■□□□□ 0.28
KDELR3O43731 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.78■□□□□ 0.28
KDELR3O43731 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDELR3O43731 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDELR3O43731 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.78■□□□□ 0.28
KDELR3O43731 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDELR3O43731 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDELR3O43731 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.78■□□□□ 0.28
KDELR3O43731 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.78■□□□□ 0.28
KDELR3O43731 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KDELR3O43731 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.77■□□□□ 0.28
KDELR3O43731 PCDHA14-201ENST00000506751 2298 ntBASIC16.77■□□□□ 0.28
KDELR3O43731 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
KDELR3O43731 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
KDELR3O43731 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.77■□□□□ 0.28
KDELR3O43731 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.77■□□□□ 0.28
KDELR3O43731 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDELR3O43731 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.77■□□□□ 0.28
KDELR3O43731 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDELR3O43731 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDELR3O43731 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
KDELR3O43731 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
KDELR3O43731 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDELR3O43731 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
KDELR3O43731 AC142381.1-201ENST00000426099 345 ntBASIC16.77■□□□□ 0.28
KDELR3O43731 FAM58DP-201ENST00000428076 619 ntBASIC16.77■□□□□ 0.28
KDELR3O43731 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.77■□□□□ 0.28
KDELR3O43731 AC023141.5-201ENST00000458585 616 ntBASIC16.77■□□□□ 0.28
KDELR3O43731 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.77■□□□□ 0.28
KDELR3O43731 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.77■□□□□ 0.28
KDELR3O43731 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.77■□□□□ 0.28
KDELR3O43731 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.77■□□□□ 0.28
KDELR3O43731 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.77■□□□□ 0.28
KDELR3O43731 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDELR3O43731 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
KDELR3O43731 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDELR3O43731 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
KDELR3O43731 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
KDELR3O43731 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KDELR3O43731 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
KDELR3O43731 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.77■□□□□ 0.27
KDELR3O43731 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KDELR3O43731 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
KDELR3O43731 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
KDELR3O43731 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
KDELR3O43731 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.77■□□□□ 0.27
KDELR3O43731 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KDELR3O43731 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDELR3O43731 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDELR3O43731 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDELR3O43731 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.76■□□□□ 0.27
KDELR3O43731 FOXO1B-201ENST00000504678 1527 ntBASIC16.76■□□□□ 0.27
KDELR3O43731 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDELR3O43731 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDELR3O43731 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.76■□□□□ 0.27
KDELR3O43731 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.76■□□□□ 0.27
KDELR3O43731 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDELR3O43731 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDELR3O43731 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.76■□□□□ 0.27
KDELR3O43731 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms